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SaskSAGE is package designed to exploit SAGE data. Csage is employed to identify and match SAGE tags in a biologically meaningful manner. Tags are analyzed for significance using a Chi squared test for independence between TAG and treatment.
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Mseg is a generic region-based multi-scale image segmentation algorithm designed with some optimizations for remote sensing imagery. The algorithm can be used as a low level processing part of an object-oriented image analysis system.
GPSylon is a Java moving map application that is able to display maps like in an atlas and show your position by the use of a gps device. It may track your path, load overlays (e.g. shape files), download maps from expedia servers. - The source code was moved to github!
Conrad is both a high performance Conditional Random Field engine which can be applied to a variety of machine learning problems and a specific set of models for gene prediction using semi-Markov CRFs.
THIS LIBRARY IS NOT UNDER ACTIVE DEVELOPMENT (sorry).
AIMLBot (Program#) is a small, fast, standards-compliant yet easily customizable .NET dll implementation of an AIML (Artificial Intelligence Markup Language) based chatter bot. AIMLBot has been tested on both Microsoft's runtime environment and Mono.
pyPal is a jabber based chatterbot that can be used to launch commands remotely as well as to make some good conversation. It is expected to be capable of multi-language learning.
JVnSegmenter is a Java-based and open-source Vietnamese word segmentation tool. The segmentation model was trained on about 8,000 sentences using Conditional Random Fields (FlexCRFs). This tool would be useful for Vietnamese NLP community.
baobab is an implementation of FPTrees or Frequent Pattern Trees, a pattern recognition/data mining technique. it has innumerable applications in language processing, clickstream analysis, etc.
This program takes to ANSYS mesh output from Pro-Engineer (Pro-E) and translates it into the input format for CalculiX, an open source FEA program. It only works with mechanical structures.
These simple programs are for doing data reduction and then display of columns of tab delimited data. They are designed to be piped together so you can do multiple things at once. This means they typically read from stdin and output to stdout.
The project aims at developing and maintaining owlutils - a collection of unixish command-line utilities for processing ontologies stored in owl files.
Cell Motility Analysis Package analyzes timelapse sequences of moving cells. Various quantitites characterizing motility are calculated, including normal velocity of the membrane, cell contact area, and spatio-temporal auto-correlation functions.
OBOES (Open Biomedical Ontology-Based Enrichment and Search) is an information-theory-based platform that embeds new integrative methods allowing biologists to evaluate new hypotheses.
A cross-platform cellular automaton facility. Implements simulation and visualization of multi-dimensional cellural automatas locally or in distributed mode.
OpenEERS (Open Earthquake Engineering Response Simulator) is a Matlab program for computing and animating the linear elastic response of discrete multiple degree of freedom structural systems using Newmark's Method.