Search Results for "research"

The Anteater moves to a new site, available under tranalyzer.com. This tool generates extended netflow-like flow/packet statistics from large pcap files or ethernet interfaces. It is intended to serve as a tool for IT troubleshooting, encrypted traffic mining, AI preprocessing and forensic analysis. A packet based "tshark mode" for detailed header and content inspection is improved for troubleshooting and security purposes. Flow based and packet based content inspection and extraction,...

Wings for NONMEM (wfn) is a set of DOS batch files and awk scripts to make the use of NONMEM more convenient. Simpler NONMEM execution: nmgo runname Extended control stream with user defined names for THETA(), etc. Automatic structured output ...

Genomecomb is a package for the analysis of complete genome data. It can be used to compare, annotate and especially filter the results of complete genome sequencing.

...It is adapted (by the same authors) from code that was originally supplied on a CD with the first edition of the book [1] and is now made available under the GPL3 license. In brief, we encourage everyone to use the software in your studies and research, to study and modify the source-code and to share it widely. However, you are not permitted to include any of our code in a closed-source project.

Theodore is a tool for semi-automated hybrid assembly of genomes, improving assembly quality by combining multiple information sources.

This collection of tools forms the basis of a pipeline for the complete enumeration of the number of solutions present in a model that maximizes a single objective function.

The Thot toolkit repository has moved to http://daormar.github.io/thot/ Thot is a toolkit for statistical machine translation. The new Thot toolkit includes fully automatic and interactive machine translation, incremental training of statistical models, parallel estimation, ...

ExonFinder provides a pipeline to extract novel cassette exons and novel retained-introns from the results of mapping cross-species ESTs against a target genome via blat.

To get access to the code, please check it out with svn as described in the code section.

GDCBOx helps to acquire values in your network from measuring devices and transfers these values to a server. GDCBox is a package distributed für embedded linux systems such as OpenWRT.

SIPeS - Site Identification from Paired-end Sequencing

An SQL handler to interface multiple databases data to the OpeNDAP Hyrax (BES) server. Written in C++, it uses unixODBC to query DB and can be dynamically extended to use proprietary ODBC API driver in many easy ways. It is bundled with scripts to ge

MBDyn_sim_suite is a collection of free pre&post-processing tools and simulation models for the open-source multi-body analysis software MBDyn forming a general purpose simulation environment for structural dynamics with an emphasis on wind turbines.

Collection of scripts converting structure data files into different formats (e.g. CTRL to POSCAR).

AQUA is a suite of programs for Analyzing the QUAlity of biomolecular structures that were determined via NMR spectroscopy. AQUA was developed by Ton Rullmann and Jurgen Doreleijers in the NMR Spectroscopy Department, Utrecht.