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AppleScript Utilities for Working Quickly with the FASTA File
...FASTA Gene Concatenater strings the DNA sequences of each taxon in a set of pre-aligned FASTA files with identical taxa. Specifically designed to prepare RAxML analyses, it conveniently creates a partition file in addition to the concatenated file.
GenBank Renamer automatically renames the taxa in a FASTA file downloaded from GenBank in the format Genus_species_accession