Search Results for "sequencer"
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Showing 12 open source projects for "sequencer"
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epics-sequencer-HZB
The EPICS SNL Compiler and Sequencer
The Sequencer implements a language for programming state machines with the EPICS framework. EPICS is developed collaboratively and used worldwide to create distributed soft real-time control systems for large scale scientific instruments. SNL borrows most contructs from the C programing language and adds some new statements for defining states and conditions for transitions between states. -
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AstroTimer
Astrophotography image capture, session sequencer / PHD2 interface
Astrophotography capture using ASCOM interfaces with mount and camera devices and interfaces with PHD2 for guiding and dithering. Database for search of DSO objects, Sun, Moon, planets, minor planets and comets. Image platesolving using ANSVR, local astrometry under WSL or astrometry.net site. -
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Jack LIRE (Linked Record)
Quantum universal object system with referencing and genetics
Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from... -
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Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
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A programmable signal generator and RF synthesizer for scientific experiments, especially quantum computing and quantum information processing. It includes hardware, firmware, software, and documentation, all under an open source license.
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Dress Up RNA seq
End-to-end automated pipeline of RNA seq packages for an HPC system
The purpose of DressUp is to create an end-to-end RNA seq pipeline in which all of the steps of analyzing data from an Illumina sequencer is done in one step in an HPC environment. RNA seq programs included are TopHat, CuffLinks, CuffDiff, CuffMerge, FastQC, and trimming using the FastX toolkit. DressUp facilitates RNA seq programs by streamlining various packages into a single script. That script executes the RNA seq programs on a batch cluster system. Upon execution of the script, jobs are submitted to the cluster depending on attributes set up in the configuration file. ... -
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The Open HeliSphere project encompasses the bioinformatics tool suite for the HeliScope single molecule sequencer.
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DEPRECATED PROJECT! SolexaTools is becoming the SeqWare project (http://seqware.sourceforge.net) to better reflect its expanded sequencer support. Please go to this project page for code and documentation.
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Convert time sequence data to C code which can be compiled and executed to generate data for output to hardware.
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Utility to convert the binary file format from an ABI PRISM TM 377 DNA Sequencer to an xml file. New project page: https://github.com/eriksjolund/abi2xml abi2xml was migrated to Github 6 February 2020.
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Rapid Sequencer Programming utility, which once developed, will expedite the development of PLC Sequencers (or Drums) . This software will be able to output variable data that will be imported by the PLC Program being used
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StageLight Basic is a simple automated stage lighting sequencer idea for Schools, traveling performers, shops and small theatres.
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