Molecular dynamics by NMR data analysis
Crystallographic software for displaying voxel maps - electron density
A comprehensive and flexible quantification tool for proteomics data
java library for XML, HTML, or SVG generation + bioinformatics classes
A program for associating taxonomic information in a phylogenetic tree
Analysis and visualization of complexome profiling data.
Get specific sequences from a FASTA or FASTQ file.
A novel transcription factor complex prediction algorithm.
OpenGrowth is a program which constructs de novo ligands for proteins.
SNP calling, annotation and gene/transcripts expression quantification
Pan-genome Ortholog Clustering Tool
A Fast, OpenSource Program for Docking Ligands to Proteins and N.Acids
Molecular visualization
datasw, a tool for rapid processing of HPLC-SAXS data.
Label-free protein quantification for LC-MS
For mining KASH proteins (SUN domain-interacting proteins)
RNA-Seq based gene prediction pipeline for fungal genomes
A tool for directed ortholog search in ESTs and proteins
Find ping-pong signatures like a pro
Handy tools to process/analyze next generation sequencing (NGS) data