Search Results for "hiv"

...There are currently several prototypes available: --cellPAINT_coronavirus includes a newly-redesigned user interface, and molecular building blocks for coronavirus, blood plasma, and a simple human cell --cellPAINT_exo includes hand-painted sprites created by Julia Jimenez during an internship, and also allows input of custom sprites through Mesoscope --cellPAINT_VR is a 3D virtual reality version of cellPAINT, with molecular building blocks for a red blood cell cytoskeleton --cellPAINT_2D is the initial alpha release of cellPAINT, with building blocks for HIV, blood plasma, and a human T-cell. For more information and tutorials, see our website at https://ccsb.scripps.edu/cellpaint Please submit any bug or feature requests to our ticket page.

This code has been used in the study: Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa; PLoS Pathogens 2019 https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1007976 Please note that the code includes test input data that does not necessarily reproduce the results included in the manuscript.

This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population.

HIVM, An Application for Prediction of HIV Drug Resistance using Support Vector Machine Algorithms

TESMART system was aimed to assist HIV/AIDS patient data management who are on antiretroviral therapy (ART) treatment in resource limited area. The project was launched since 2003 in Malawi. (not finish)

This program is designed to simulate the spread of HIV/AIDS across a population, as well as the spread of narcotics such as Pot, Cocaine, and Heroin. It shows realtime in OpenGL graphics how people interact with each other and accumulate various diseases

A project to create an interactive, scientifically-accurate 3D model of the HIV virus. Particularly intended for use in education.