Search Results for "combinatorial"
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Showing 27 open source projects for "combinatorial"
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ChangeGear provides IT staff with the functions required to manage everything from ticketing to incident, change and asset management and more. ChangeGear includes a virtual agent, self-service portals and AI-based features to support analyst and end user productivity.
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CGAL
The Computational Geometry Algorithms Library
CGAL or the Computational Geometry Algorithms Library is a C++ library that gives you easy access to a myriad of efficient and reliable geometric algorithms. These algorithms are useful in a wide range of applications, including computer aided design, robotics, molecular biology, medical imaging, geographic information systems and more. CGAL features a great range of data structures and algorithms, including Voronoi diagrams, cell complexes and polyhedra, triangulations, arrangements of... -
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OR-Tools - Google Optimization Tools
Google's software suite for combinatorial optimization
Google Optimization Tools, also known as OR-Tools is an open-source, fast and portable software suite for solving combinatorial optimization problems. These encompass problems in vehicle routing, flows, integer and linear programming, and constraint programming. This suite contains a number of solvers, namely: a constraint programming solver; a linear programming solver; wrappers for commercial solvers (like Gurobi or CPLEX) and other open source solvers (SCIP, GLPK, etc.); among others... -
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MzDOCK - Multiple Ligand Docking Tool
MzDOCK is A Virtual Screening Tool For Drug Discovery Research
- Molecular Docking Virtual Screening Tool To Aid In Drug Discovery Research. - Developed with Synchronized functioning of Python and Batch scripts - Compatible on Windows - Accepted on Journal of Computational Chemistry - DOI: 10.1002/jcc.27390 -Integerated With Pymol-open-source for visualizing interaction (PSE file) generated from MzDOCK - Combinatorial Molecule Generation - Integrated with Molecule Drawing Tool - JSME Editor - If you are facing any issues or for queries . Contact us... -
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nars2000
NARS2000: An Experimental APL Interpreter
APL is an arrary-oriented language initially conceived in the 1960s by Kenneth E. Iverson, IBM Fellow and 1979 ACM Turing Award recipient. It is ideally suited to computer programming because it subsumes the tedious aspects of the job allowing the programmer to concentrate on the heart of the project. NARS2000 is a Free Open Source implementation of APL. For more details on this project, visit the NARS2000.org website. -
Google Cloud’s AI-powered APIs help you translate documents, websites, apps, audio files, videos, and more at scale with best-in-class quality and enterprise-grade control and security.
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Combinatorial Game Suite
A computer algebra system for research in combinatorial game theory.
STARTING WITH VERSION 2.0, CGSUITE HAS MOVED TO GITHUB. The latest version can be found at the CGSuite homepage: https://www.cgsuite.org/ This page is preserved for archival purposes only and is no longer being maintained. -
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Jack LIRE (Linked Record)
Quantum universal object system with referencing and genetics
Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from... -
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CompleXChange
differential analysis of combinatorial protein complexes
The increasing wealth of transcriptomic data and current computational tools enable to infer how protein interactomes and complexomes may be assembled in specific samples. With CompleXChange this information can be exploited to conduct differential analyses of the dynamic protein complexome in a quantitative manner. The corresponding publication can be found on https://doi.org/10.1186/s12859-019-2852-z. -
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DACO-algorithm
A novel transcription factor complex prediction algorithm.
... interaction networks and domain-domain interaction networks with the cluster-quality metric cohesiveness. The metric is locally maximized on the holistic level of protein interactions while sophisticated connectivity constraints on the domain level are utilized to account for the exclusive and thus inherently combinatorial nature of the interactions within such assemblies. The original publication can be found on http://bioinformatics.oxfordjournals.org/content/30/17/i415 . -
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OptFrame is a framework for efficient implementation of metaheuristics and optimization methods. It has already been used in some real combinatorial problems and applied to Operations Research. Since November 2017, project has been moved to GitHub (new releases will also be included here in SourceForge, but Git mainline is no longer supported here). For more information, visit: https://github.com/OptFrame/optframe
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It protects your internal resources such as behind-the-firewall applications, teams, and devices.
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MoCObench
Benchmark instances for multiobjective combinatorial optimization
Benchmark instances for multiobjective combinatorial optimization -
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The complexity of cellular networks is an outstanding challenge for documentation, visualisation and mathematical modelling. In this project, we develop a new way to describe these networks that minimises the combinatorial complexity and allows an automatic visualisation and export of mathematical (ODE/rulebased) models.
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OPTSYS Framework Optimization Suite
Software Framework for Combinatorial Optimization using Metaheuristics
Die OPTSYS Framework Optimization Suite ist nicht nur eine Optimierungssoftware, sondern darüber hinaus ein umfangreiches Softwareframework für die kombinatorische Optimierung mit einem besonderen Fokus auf heuristische Lösungsmethoden. Das Framework versteht sich als Expertensystem zur Abbildung von kombinatorischen Optimierungsproblemen und für die Umsetzung, Anwendung und Evaluierung von zugehörigen Lösungsmethoden. Aufgrund der vielfältigen Funktionen zur Evaluation eignet es sich... -
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caplib
Correct, translate and analyze combinatorial library sequencing data
Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file. -
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Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
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RaTrav
mean first passage times and node occupancies calculations
RaTrav tool was designed to support computational biology studies where mean first-passage times (MFPTs) between initial and single or multiple final states in network-like systems are used. The tool approves arbitrary networks (graphs) where a dynamics of the Markovian type takes place. Two methods are made available for which their efficiency is strongly dependent on the topology of the defined network: the combinatorial Hill technique and the Monte Carlo simulation method. References: M... -
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Water Retention on Magic Squares Solver
Water Retention on Magic Squares with Constraint-Based Local Search
A Constraint-Based Local Search solver for the Water Retention on Magic Squares-problem. The problem is a very hard combinatorial optimisation problem, invented by Craig Knecht. More can be read about it at: http://en.wikipedia.org/wiki/Water_retention_on_mathematical_surfaces Craig's website for the problem: http://www.knechtmagicsquare.paulscomputing.com/ The solver is mainly based on the theory and ideas from my bachelor thesis, which I wrote at Uppsala University, Sweden, for the Astra... -
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A Generalized Combinatorial Approach for Detecting Gene-by-Gene and Gene-by-Environment Interactions
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Mircrogrid market is a proof-of-concept implementation of a combinatorial heat and power double auction exchange. With this platform energy consumers and producers can buy or sell heat and power resources on demand for certain times of the day.
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Genijatorics is a library providing solutions to enumerative combinatorial problems. The most prominent example of its use is for generating events in specified date range from CRON-like descriptions. It also serves for educational purposes.
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ConGENER package is a set of combinatorial-computational tools to study families of halogen substituted molecules, so called congeners.
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GLARE is a library and a software for product based optimization of reagent lists in the context of a chemical combinatorial library design. Large virtual combinatorial libraries containing 10^12 products have been optimized within a second.
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A Python and ANSI C implementation of the Edelsbrunner hyperplane arrangement algorithm described in his book Algorithms in Combinatorial Geometry, supporting arbitrary dimensions, exact rational arithmetic using gmp, and using David Avis lrs solver.
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Implement Robin Hanson's "simple combinatorial information market maker", specifically for rapid and reliable solution of "knights and knaves" puzzles. This toy domain makes development easier, and the scope can be expanded later.
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Generating combinatorial objects: exponents, all exponents, permutations, color permutations, arrangements, combinations for any numbers and words.