Search Results for "batch image cropper"
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Showing 12 open source projects for "batch image cropper"
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iCn3D
Web-based protein structure viewer and analysis tool
"I see in 3D" (iCn3D) Structure Viewer is not only a web-based 3D viewer, but also a structure analysis tool interactively or in the batch mode using NodeJS scripts based on the npm package icn3d. iCn3D synchronizes the display of 3D structure, 2D interaction, and 1D sequences and annotations. Users' custom displays can be saved in a short URL or a PNG image. The complete package of iCn3D including Three.js and jQuery is in the directory "dist" after you get the source code with the "Code... -
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PyTorch Geometric
Geometric deep learning extension library for PyTorch
It consists of various methods for deep learning on graphs and other irregular structures, also known as geometric deep learning, from a variety of published papers. In addition, it consists of an easy-to-use mini-batch loader for many small and single giant graphs, a large number of common benchmark datasets (based on simple interfaces to create your own), and helpful transforms, both for learning on arbitrary graphs as well as on 3D meshes or point clouds. We have outsourced a lot... -
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astap program
Stacking program, astrometric (plate) solver, fits file viewer
ASTAP, Astrometric STAcking Program, astrometric solver and FITS image viewer. This program can view, measure, "astrometric (plate) solve" and stack deep sky images. Main features: - Stacking of astronomical images including dark frame and flat field correction - Native fast astrometric (plate) solver. - Alignment using an internal star match routine, internal Plate Solver, manual or ephemeris. - FITS viewer with swipe functionality, deep sky and star annotation... -
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PGMania
Astrophotography image & video processor. Full processing cycle
PGMania - all in one astrophotography package for processing deep sky images. It provides wide and unique functionality, a powerful and flexible tool with a clear and convenient interface for astrophotography image processing. The program performs all processing cycles, including alignment, calibration, stacking, post-processing images, does many secondary operations and much more. With PGMania at the output, we get a clean signal, without hot pixels and noise. All you need to calibrate... -
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SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
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JPIV
Particle Image Velocimetry
JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/ -
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CognitionMaster
object-based image analysis framework
Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34 -
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XParallax viu
Software for automated astrometry
XParallax viu is a free software tool for automated astrometric data reduction of astronomic CCD images. It helps astronomers to perform an accurate astrometric reduction of dozens ore even hundreds of images which can be used in subsequent data analysis process. Fit headers generated by this software are fully compatible with other commonly used image utilities like SAO DS9 or Aladin Sky Atlas. -
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MatrixUser
A Multi-functional GUI-based Program for Image Processing and Analysis
The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation. However, within Matlab, most of image manipulation functions are limited... -
Eptura Workplace SoftwareWith the world of work changed forever, it’s essential to manage your workplace and assets together to effectively create a high-performing environment. The Eptura experience combines the power of workplace management software with asset management, enabling you to effectively operate your building and facilitate hybrid work.
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colonyzer image analysis software
Image analysis estimating cell density in arrayed microbial cultures
Image analysis software for quantification of cell density in microbial cultures (e.g. S. cerevisiae) growing on solid agar plates. Specialises in detection of extremely low cell densities. Forms part of the Quantitative Fitness Analysis (QFA) workflow: http://research.ncl.ac.uk/qfa/ Suitable for high-throughput, genome-wide analysis of culture libraries when combined with the following qfa R package: http://qfa.r-forge.r-project.org/ This is the version presented, used... -
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DICOM Anonymizer replaces the patient names in all the DICOM files in a folder (and sub-folders) with other strings you assigned. Works as a batch and works fast. Supports number index. Anonymizing is required for medical image processing.
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FluoroCorrect is a Matlab-based, open source software package designed for correcting image deformations introduced by X-ray image intensifiers in fluoroscopy images. All tools in this package are scriptable, allowing for batch processing.
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