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The BioSimz project aims to deliver a library (as well as the interface) to conduct large-scale biomolecular simulations at their atomic scales of detail. The initiative idea is to observe the protein crowding in vivo; it now can do much more than that!
ODSSA - is a system for storing, searching and viewing spatially and temporally indexed photos, videos, GIS tracks, ESRI shape, and other files. It consists of an import tool, open API Server, browser based Client for search and viewing files.
An open-source desktop application for load/performance testing a web site. It has a very simple UI to configure the load test. The future plan includes transaction support, record, playback and support for load injector agents.
TreeViewJ is a Java tool for visualizing, editing and analyzing phylogenetic trees. The software allows researchers to color and change the width of branches, and add names to nodes. Collection dates can be mapped onto a timeline, and sorted.
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The linkFlow computer software program enables the user to perform civil hydraulic design tasks in a manner similar to a calculator. Vegetated and reinforced channels of any section can be designed using allowable shear and variable n values. c 2010
The InfoVis Toolkit is a Interactive Graphics Toolkit written in Java/Swing to ease the development of Information Visualization applications and components.
In Systems Biology models are created in various formats (Matlab, Java, C/C++, Python, ...). "Annotate Your Model" will help you to link your model to biological web resources by creating a CSV file containing MIRIAM annotations.
IPC 175x Utilities is a collection of software tools to support the IPC 1750 series of supplier declaration standards. These utilities are being developed to help electronics industry supply chain stakeholders implement the IPC 1750 series of standard.
A Matlab toolbox for interfacing with the pure JAVA numerical library Snifflib. This toolbox provides convenience m-files for interoperability with Snifflib from within an active Matlab session running a JAVA virtual machine.
This is a unix distribution I made so that I can develop from anywhere--a virtual desk if you will. Some of my friends and colleagues have found it useful, and an easily accessible place to put the operating system up is on the internet.
A java application that shows speed, direction and position in mobile phones that has a built in gps. Primary for use in boat or car, but hiking is fine too. To install just download the newest gpspal_x_x_x.jar file and send it to your phone.
A universal navigation system for most kind of mobile phones, smartphones, portables and laptops for different kind of navigation: car/bicycle/pedestrian navigation, geocaching and maybe more.
A basic quadratic equation calculator written in Java with a command-line interface. Handles fractions and imaginary roots. Thanks to Doug Lea at SUNY Oswego for his work on the Fraction class.
Annotate data sets that are stored in a Tranche repository. Administrators can maintain multiple versions of annotation standards - structured requested information. Supports controlled vocabularies.
Model-Driven Embedded Systems Design Environment for the Industrial Automation Sector: The aim of this open source initiative is to provide a multi-domain model-driven embedded systems design approach for Industrial Automation and Control Systems.
Clados is a java package that implements a multivector in a Clifford Algebra. Algebras (over real numbers) with any signatures may be used. A calculator and associated documentation is also included to help users learn how things work.
BorderFlow implements a general-purpose graph clustering algorithm. It maximizes the inner to outer flow ratio from the border of each cluster to the rest of the graph.
Plexus is a Java library with specifications and implementations for generic graph data structures. Like the Java Collections Framework, vertices and edges are containers for arbitrary user-defined objects.
JCrocus is a GUI (Graphical User Interface) that allows representing the network topology definition of microwave cavity filters based on the coupling matrix approach as well as simulating and plotting its frequency response