Search Results for "gnu/linux" - Page 94
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Showing 17430 open source projects for "gnu/linux"
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A key goal for NEMO is the development of a formal logic (“ontology”) to support data sharing, logic-based queries and mapping/integration of patterns across data from different labs, different experiment paradigms, and different modalities (EEG/MEG)
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems.... -
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Asteroid Data Hunter Extractor
convert arch.H files to FITS format
This project contain application to extract images from arch.H format used by Asteroid Data Hunter, and also compiled releases of updated versions of Asteroid Data Hunter itself. -
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HSRA
Hadoop spliced read aligner for RNA-seq data
HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a... -
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An easy to use application to design your kitchen garden or your house farm. Helps you plan your plants ( vegetables, fruit trees, herbs, flowers ) so that it respects the rules of crop rotation and companion planting. Based on square foot gardening. Requires Java 8.
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The SourceForge OpenRasMol project is an adjunct to the RasMol and OpenrasMol project at http://rasmol.org. It is hoped that the SourceForge OpenRasMol project will provide a convenient focal point for active collaborative contributions.
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TimingDrawer
Text based timing diagram generator
This tool generates timing diagrams for documenting hardware design. It reads the description from a text file with a simple syntax. It generates vector graphic (EPS, SVG or EMF format). It can be used in command line mode or with a GUI. It is written in Python and works on any platform. -
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A graphical tool to design a bicycle (s) geometry and derive drawings from its configuration rattleCAD moved to www.rattleCAD.com
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FreeSensors is a modular robotics system based on expansion shields, aimed to educational purposes.
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Tissue Simulation Toolkit is a two-dimensional library for the Cellular Potts Model (Graner and Glazier 1992; Phys. Rev. Lett. 69, 2013), which is increasingly used by computational biologists to study tissue patterning and developmental mechanisms.
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A small program for quickly generation of g-code. It can generate circular pockets, square pockets, etc. Now it can generate program from DXF. You can support a development with donation on my paypal page www.paypal.me/alexdevisa Небольшая программа для генерации G-кода. Может генерировать различные карманы, а так же поддерживает генерацию G-кода из файла DXF. Поддержать проект можно пожертвованием любой суммы на моей странице paypal - www.paypal.me/alexdevisa
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FastFlow: programming multi-core
Pattern-based multi/many-core parallel programming framework
...Thanks to its very efficient CAS-free communication/synchronization support (e.g. few clock cycles core-to-core latency), FastFlow effectively supports the exploitation of fine grain parallelism, e.g. parallel codes managing very high frequency streams on commodity multi-core. FastFlow works on x86, x86_64, PPC, ARM, and Linux, Mac and Win XP/7. From Jan 1, 2018 code development migrated on GitHub at https://github.com/fastflow/fastflow -
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Vibtoolbox is a set of command line utilities for analysis of vibration and acoustic test data. The vibtoolbox utilities use the standard UNIX filter model and communicate via UNIX pipes.
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packeis
Check for selection of RNA secondary structure
PACKEIS is a software that allows us to assess whether or not a coding sequence represents an extreme solution in terms of backfolding, considering the alternative coding sequences that could have been realized by evolution in order to encode the given peptide sequence based on usage of synonymous codons. -
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EMPCCCC
PC XBee wireless control of an Arduino
Operate Arduino microcontrollers wirelessly from a PC using XBees or locally using IR controllers. EMPCCCC : Embedded Micro PC Command Control Communication. Arduino microcontroller projects : building instructions, Arduino operation and Delphi PC Command Control Communication Code. EMPCCCC Version 3.1.13.2013 and after is working. Arduino code is included in the zip file. Arduino code for other projects is available as a separate zip and is updated separately and more often. All code... -
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SystemC Network Simulation Library (SCNSL) is an extension of SystemC to allow modelling packet-based networks such as wireless networks, ethernet, fieldbus, etc. As done by basic SystemC for signals on the bus, SCNSL provides primitives to model packet trasmission, reception, contention on the channel and wireless path loss. The use of SCNSL allows the easy and complete modelling of distributed applications of networked embedded systems such as wireless sensor networks, routers, and...
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DIY Arduino Boards IO I2C
DIY Arduino Boards for IO using port expanders and I2C
DIY Arduino Boards PCF8674 MCP23017 74HC595 CD4021 I2C Parallel IO Piezo buzzers See the Files section for a wide range of sensors and sample code Schematics PCB Layout Sample Code -
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arknos
Intelligent OS Interface
Command launcher with task managment and others capabilities. -
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TEESer
Tool for Engineering Emergent Selforganizing bEhavioR
Teeser is a java-based integration framework for engineering emergent self-organizing behavior in distributed systems. It contains tools for analysis, tuning, macroscopic probing and simulations of distributed systems. Library of tools can be extended and everybody is encouraged to provide and share its tools with the community. The main idea is to provide application designers ability to seamlessly use tools which are helpful to design self-organizing behavior. Designers can continue to... -
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VEmath
Arduino library of mathematical functions
This library can help to add some algebra to your Arduino project. -
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MoCalc2012
GUI for MOPAC, DFTB+, GAMESS, Firefly, NWChem, ORCA and PSI4
MoCalc2012 is a simple, efficient Graphical User Interface for MOPAC, DFTB+, GAMESS(US), Firefly, NWChem, ORCA and PSI4. -
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rMATS-ISO
rMATS-Iso is a generalization of rMATS for complex splicing patterns.
rMATS-Iso is a generalization of the rMATS statistical framework, to detect differential splicing modules with complex splicing patterns using replicate RNA-seq data.
