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TBLTools is a set of GATE processing resources that implements the Fast Transformation Based Learning Algorithm. You can train it to learn rules for NLP tasks such as Named Entity Recognition and Shallow parsing.
EDI-Knight is an integration and translation software focussing EDI (Electronic Data Interchange), CSV (Character Separated Values), and XML. There's a command line tool for batch processing as well as a Java/J2EE conformant API.
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This project is for converting PCB RS274X gerber files to RS274NGC Gcode files. Currently this software is in the early development stages. Currently working to simplify the program and improve reliability.
T-Rex (Trainable Relation Extraction) is a highly configurable machine learning-based Information Extraction from Text framework, which includes tools for document classification, entity extraction and relation extraction.
SaskPrimerFS is a pipeline for designing gene family specific PCR primers. SaskPrimerFS is designed to infer intronic regions of a target species and design for them by utilizing DNA sequence information from a reference organism.
Fibonacci, to unix shell. Calculate large fibonacci numbers max. 255 digits, and writing to console. Program code writing in pascal language, and very small.
sbmlop is a command-line utility to create, view and manipulate SBML (the Systems Biology Markup Language). It is ideally suited for operating on large batches of SBML files, and can extract and modify information using regular expressions.
The purpose of Mitrion-C Open Bio Project is to develop FPGA accelerated bioinformatics applications for the Mitrion Virtual Processor. The first accelerated application is NCBI BLAST.
This project is a GUI or command line interface for converting US measurements to metric. A simple calculator has been added for help with small measurements.
Combean is a Java framework for mathematical structures and optimization algorithms. Through a set of Java interfaces and JavaBeans-based config, Combean glues optimization codes together - leading to more interoperable, adaptable and flexible solutions.
Celsius is a data warehouse that provides web services for upload, archival, download, annotation, quantification, and normalization of all Affymetrix microarray platforms.
This set of C++ classes allows the user to load data from custom Affymetrix microarrays. This is a good platform for new method development and it contains several common normalization algorithms.
Basic implementation of K-nearest neighbour Algorithm and the application of KNN to classify protein sequences as transmembrane beta barrel or non-transmembrane beta barrel on the basis of whole sequence amino acid composition given as input.
FoamBlade provides a complete toolchain for hotwire foam-cutting. FoamBlade currently supports 4-axis hot-wire foamcutting machines that are connected to the parallel port. Generating cut-files from special built DXF-Files is also possible.
The Stem Cell Artificial Neural network project entails the analysis and integration of genomics data for extracting the stemness signature of several tissues by training a multiclass single-layer linear artificial neural network.
GRAMophone is an algorithmic generator of music composition. The music is generated using two kinds of formal grammar: Chomsky’s grammar for TOP DOWN approach to the composition and a reduced version of Lindenmayer grammar for BOTTOM UP approach.
x2svg is software to graphically lay out files like XML Schema, DTDs and Java property files as scalable vector graphics (SVG). Diagrams can be converted into PDF, PNG, TIF and EPS files directly from within x2svg. A simple GUI and ant integration exist.