Search Results for "linux command" - Page 73

TaDaPro is a command-line utility to operate with numerical column tabulated data. It is intended for operations that are cumbersome to do by hand in a spreadsheet, and for transformations that have to be applied as a batch process on many files.

FElt is an open source system for finite element analysis, primarily for mechanical problems. FElt includes command line tools, an X11 interface for pre- and post-processing, and a Windows editor interface with some post-processing capabilities.

A fast parallel error correction tool for short reads. This software have been added to the NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/ec_on_tesla.html)

Framework: Project for Evolutionary Predator Prey Algorithms, used to implement an evolutionary scheme based on the developement by van Laumanns. Implement testproblems, special behaviours, environments, and other yet not known features.

Command line molar mass calculator that provides typo checking and options for printing elemental analysis and saving a record of previously calculated molar masses.

Genome Properties is a system for asserting specific structures, pathways or systems are present in a genome to provide high-level conceptual descriptions of genomic content.

generate wave-form by function

An open source implementation of a protein threading program based on the energy functions and techniques originally introduced by Prospect.

The CodeTime platform covers every aspect of parallel software from authoring, through distribution, to run-time. Its goals are: high programmer productivity; write once, run high performance anywhere; and wide acceptance.

Serial-IO is a simple program to send and receive data from a serial interface. The GUI is designed like a chat window with a transmitter/receiver field and a command line to send characters and integer values.

sd_clust is Expressed Sequence Tag (EST) clustering software. It produces clusters very similar to those produced by d2_cluster. The project is now being hosted on google and can be found here - http://code.google.com/p/sdclust/

Flowlive is a CFD (Computational Fluid Dynamics) program with a special focus on multiphase flow with a Euler-Lagrange model.

The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.

Corikon is a simple software to visualise the correlation matrix of a set of data, using the iconography of correlations.The first step of the project has been reached: rendering the distribution of data according to the user wills.

Software package for building, training and scoring hidden Markov models (HMMs).

Given a reference sequence, simhtsd will create a large set of short nucleotide reads, simulating the output from today's high-throughput DNA sequencers, such as the Illumina Genome Analyzer II.

This software contains a port of the Velleman K8061 USB Interface library (k8061.dll) and a command line interface for using the card on a linux system.

A suite of programs for performing particle image velocimetry, a common technique in the field of fluid mechanics. The suite includes programs to perform cross-correlation, synthetic image generation, as well as graphical visualization.

An extend version of NuSMV, which supports symbolic model checking of ETL and APSL

RHydrogen is a lightweight open-source c++ program which solves the Dirac equation for Hydrogen-like atoms. This implementation is based on the ROOT program library.

geoCtools manipulates geo-data in csv or kml files. Generates kml files for Google map/earth. Polygons can be: merged, simplified, locations (icons) added with user data in the balloons, selected via FIPS code. Uses libxml2

Jazzyk - a special-purpose programming language interpreter for development of modular intelligent agents based on a plug-in architecture.

TopoGen is a small PyGTK application which will make a topographic image overlay for Google Earth using the given coordinate boundaries.

EXPR is a software package for the recording and analysis of animal behaviour. Recording is done by pressing particular keyboard keys on the computer. The software then saves the sequence and timing of behaviours. Note that the DOS (1995: https://sourceforge.net/projects/expr/files/expr/fb-port-expr-00-1995/EXPR-binary-DOS-0.0.1995.tar.gz/download) version is currently the only fully functional and is recommended for use. On modern computers, DOS software can run in DOSBOX (https://www.dosbox.com/).

A set of *.m files for use with GNU Octave and *.sci files for SciLab. The purpose is to approximate measurement curves using natural splines.