Search Results for "linux command" - Page 67
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Showing 2463 open source projects for "linux command"
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Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
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A cross-platform library that computes fast and accurate SIFT image features. libsiftfast provides Octave/Matlab scripts, a command line interface, and a python interface (siftfastpy). Optimized with SIMD instructions and OpenMP .
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Snap (snap-pari) is a computer program for studying arithmetic invariants of hyperbolic 3-manifolds. See: Computing arithmetic invariants of 3-manifolds by Coulson, Goodman, Hodgson and Neumann, Experimental Mathematics Vol.9 (2000) 1.
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RADAR stands for Rapid Automatic Detection and Alignment of Repeats in protein sequences. RADAR identifies gapped approximate repeats and complex repeat architectures involving many different types of repeats. Radar has moved to github (https://github.com/AndreasHeger/radar)
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BARNACLE is a Python library for RNA 3D structure prediction. It can be used for probabilistic sampling of RNA structures that are compatible with a given nucleotide sequence and that are RNA like on a local length scale.
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Converts Digital Terrain Elevation Data from one level to another. (Currently only converts DTED1>DTED2) No longer in development due to personal time constraints. If there are features you desperately need, feel free to ask, or write it your self :)
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On December 8, 2009 the UK Met Office released records of worldwide land surface temperature readings. This project analyzes these records and produces output files that can be read by gnuplot and Google Earth to show temperature trends.
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Maximally flat (maxflat) digital filter design in Java, with arbitrary numbers of poles and zeros. "Maximally flat" means that the magnitude frequency response has the maximum number of vanishing derivatives at 0 and pi.
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LIGR Assembler is a sequence assembly program. It was derived from TIGR Assembler and addresses some of TIGR Assembler's shortcomings. See the CHANGES file for details.
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dprimer is a command line utility for designing degenerate PCR primers against multiple, aligned sequences. Its primary use case is searching for a family of related pathogens in a host tissue sample.
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Maximally flat (maxflat) digital filter design for Octave and Matlab. "Maximally flat" means that the magnitude frequency response has the maximum number of vanishing derivatives at 0 and pi. Handles arbitrary numbers of poles and zeros.
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DawNLITE is a Natural-Language-based Image Transmoding Engine. The software transforms an image to a video as recorded by a virtual camera panning and zooming over the image, following a natural language text description of the image.
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cifget is a DDLm dictionary import expansion utility, which generates expanded dictionaries that could be used when reading, writing, or validating CIF files
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vcif is an open source software for validation of Crystallographic Information Files. It supports lexical, parser and dictionary validation (DDL 1 and 2 are fully supported, DDLm draft partially supported)
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An efficient implementation of the Smith-Waterman algorithm that takes advantage of SIMD instruction sets in modern CPUs. The Smith-Waterman algorithm is used for sequence alignment in bioinformatics.
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bc2ld is a command line tool to translate molecular database files from BASECOL (obs. of Paris) to LAMDA format (Leiden University). This command line tool has academic use purposes.
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Tiny Calculator is a command line calculator for developers. It can resolve a complex expression mixing decimal, esadecimal an binary number. The result is automatic converted in decimal, esadecimal ad binary format.
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A cross platform Open Source implementation of Digi's "Digi Discovery" utility as well as a Java library providing the features of the ADDP (Advanced Digi Discovery Protocol) protocol. The protocol is documented at http://qbeukes.blogspot.com/search/label/advanced%20digi%20discovery%20protocol
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SystemML is an XML format for exchange of mathematical systems for numerical simulation. This toolbox offers support for the SystemML infrastructure. It is included in the distributions of SystemML execution clients, but can be installed separately.