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BACContigEditor is a simple sequence alignment editing tool, written in Java. It is originally developed for finishing BAC shotgun sequencing projects, but the program could be easily extended to the whole genome project.
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
Bringing BOINC and its projects (SETI@Home, etc.) to the Android mobile platform, through translation to Java. ATTENTION: The code is in pre-alpha stage, and currently meant mainly for BOINC developers.
SimpleGrapher is a graphing application for students. It is designed to be as simple as possible to use as well as attractive enough to use in college-level papers/projects for math or science courses.
Open source oBIX server implementation provides an infrastructure that developers can use for device integration in projects with "systems which sense" (to quote oBIX spec).
This project aims to provide a common building block for projects such as
ADEFU, SEA and VISUAL and other scada projects so that they have a common
interface to the PLC\'s they communicate with.
PLC\'s are Programmable Logic Controllers built to
Traffic Light Controlling Comparator (TLCComp) is a simulator of traffic. It is developed from Green Light District (https://sourceforge.net/projects/stoplicht/). TLCComp provides three new light controllers: Fixed-time, Fuzzy1, FuzzyN
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GELLO is an ANSI-accredited HL7 standard for creating computable, unambiguous clinical queries. This project creates an open source compiler and client-server IDE. Projects are stored in a subversion repository, and created by the RCP based client.
JMatrixCalc is a Java package used for matrix calculations. It's aim is to make developing many scientific (and non-scientific as well) project much easier and quicker. These projects include: educational software, statistics and many others.
XCalc is an infix calculator for mobile devices that support J2ME, MIDP 1.0 and CLDC 1.0.Its main features are 2d and 3d plotting of functions and its usability. It uses the Real.java library http://sourceforge.net/projects/real-java.
This project provides a Java API to access ELV's (http://www.elv.de) "Dual USB Stepmotor Interface" (USI2). The communication with the USI2 is based on the FTD2xxj (http://sourceforge.net/projects/ftd2xxj) framework.
VDC has been superseded by DVN: https://sourceforge.net/projects/dvn/ ---- The Virtual Data Center project is building an operational, open-source, digital library to enable the sharing of quantitative research data, and the development of distribute
JXML2OWL Project is divided in two sub projects: JXML2OWL API, a library for mapping XML schemas to OWL Ontologies on the JAVA plaform. JXML2OWL Mapper, an easy to use standalone application with a graphical user interface using the JXML2OWL API.
BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
PileWorks provides the organizational structure for coordinating several different projects which approach some aspect of Pile Technology. PileWorks defines a set of interfaces and implements some basic infrastructure for Pile engines and agents.
The aim of this project is to provide SAT solvers and related products to be easily embedded in Java software. The softwares found here are part of former research projects that are no longer under development but that are made available here because
The Linear Algebra class library for Java provides a full set of tools to programmers who need linear algebra operations to use in their own projects.
Currently the library supports elementary matrix operations.
This is a collection of utilities and other nifty code items developed by Thought River for use in internal projects, and made available here for public use.
Datamatrix (2d barcode) reader for Symbian based mobile phones with built in camera. Projects aim is to create a free software that can be used to decoding datamatrix barcodes. Decoded datamatrix result is shown in a dialog box or passed to browser.
Bobcat Open Source Software is an umbrella project of a number of open-source software projects developed at Ohio University, including, among others, a distributed process management system, a meeting scheduling tool, and a performance evaluation tool.
IslandEv distributes a Genetic Algorithm (like <a href="/projects/jaga">JaGa</a>) across a network (see <a href="/projects/distrit">DistrIT</a>) using an island based coevolutionary model in which neighbouring islands swap migrating individuals every