Search Results for ".java" - Page 35
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Showing 5210 open source projects for ".java"
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GeneticAlgorithms
Framework for using the Genetic Algorithms optimization heuristic.
GeneticAlgorithms is a simple and lightweight framework to implement an optimization heuristic following the Genetic Algorithms model. A genetic algorithm mimics the natural processes of evolution, selection and "survival of the fittest". This framework is intuitive and good integrated with Java 1.5 SDK and later. -
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The Dataverse Network is a Java EE5 app that enables researchers to share data on-line. It provides data citation standards, facilitates preservation, distribution and replication of data, and includes statistical analysis. More at: http://thedata.org
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Zettelkasten 3
Elektronischer Zettelkasten nach Niklas Luhmann
Auf diesen Seiten finden Sie einen elektronischen Zettelkasten für Ihren Computer, der sich am Arbeitsprinzip des Zettelkastens von Niklas Luhmann orientiert. Mit Hilfe dieses Programms können Sie die tägliche Arbeit mit (wissenschaftlichen) Texten erleichtern und wesentlich effektiver gestalten. Sowohl das Verwalten wichtiger Textstellen, Exzerpte und Zitate als auch die anschließende Verwendung dieser Textsammlung zwecks Textproduktion werden durch den Zettelkasten erheblich vereinfacht. -
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Identifiers.org is a system providing resolvable and persistent identifiers, in the form of URIs, used to identify data for the scientific community, with a current focus on the Life Sciences domain. The provision of resolvable identifiers (URLs) fits well with the Semantic Web vision, and the Linked Data initiative. The resolving services of Identifiers.org rely on the information stored in the MIRIAM Registry.
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TRNSYS-Java Coupler
A TRNSYS type that allows for a bi-directional communication with Java
...The communication between the TRNSYS type and the Java class is based on the Java Native Interface (JNI). -
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JConvert is a free unit conversion program that has a friendly user interface and can also be used with external applications. Conversions can be modified and/or added easily. Supports multiple languages. Downloads and runs in seconds! Try it now.
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Universal Java Matrix Package
sparse and dense matrix, linear algebra, visualization, big data
The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. -
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Position Data Processing
Processing of GPS travel diaries
A tool developed in Java for the automatic processing of GPS tracks to reconstruct travel diaries. -
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Pipes is a desktop system which analyzes an AutoCad(TM) drawing of a sprinkler system, checks for flaws and after these are eliminated, adds the size/diameter labels to the drawing. Tutorial: http://users.norwoodlight.com/janh/wink/autopipes-entry.htm
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The Java Data Mining Package (JDMP) is a library that provides methods for analyzing data with the help of machine learning algorithms (e.g. clustering, classification, graphical models, neural networks, Bayesian networks, text processing, optimization).
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A Tool for Retrieval, Visualization and Analysis of biological Pathways. Import a Gene or Protein Set from any Excel file. Automatically find signaling Pathways from KEGG. Integrate your Data in Seconds with a live interactive Force-directed Layout.
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SECD
Simulador Educacional de Circuitos Digitales
Educational Digital Circuits Simulator . It tries to be simple for an educational environment. Simulador Educacional de Circuitos Digitales. Intenta tener un uso muy sencillo para ser usado en entornos educacionales. -
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memesa-tools
A collection of tools used in the enumeration of solution spaces
This collection of tools forms the basis of a pipeline for the complete enumeration of the number of solutions present in a model that maximizes a single objective function. -
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Logic Calculator
A Calculator to perform logical operations
The Logic Calculator is an application useful to perform logical operations. It has three modes: (1) Evaluation of logic formulae: In this mode we have the basic boolean operations (negation, conjunction, disjunction, conditional and biconditional) so the user can insert the logic formula and the Logic Calculator displays the truth table along with the models of the formula. (2) Logical entailment: In this mode the user can insert a number of premises followed by a number of... -
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Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
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Program jobman (Job Manager) glues executables written in different languages according to a given flow. The program can run executables with arguments in parallel (multiprocessed) or in loop or in any combination of them.
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The MCISB Project contains software solutions developed in the Manchester Centre for Integrative Systems Biology, University of Manchester.
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jAgg
jAgg - Java Aggregation Operations
jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations. -
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VarScan
Variant detection in next-generation sequencing data
Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB -
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KneeTex is an open–source, stand–alone application for information extraction from narrative reports that describe an MRI scan of the knee. Given an MRI report as input, the system outputs the corresponding clinical findings in the form of JavaScript Object Notation objects. The extracted information is mapped onto TRAK, an ontology that formally models knowledge relevant for the rehabilitation of knee conditions. As a result, formally structured and coded information allows for complex...
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S2O
Converting IBM SPSS files to CDISC ODM
... - Pre- / Pilot-Studies based on spreadsheets should now be enhanced towards multi-site/multi-user data collection. Conversion of SPSS variable structure as well as entered values. To use: - Move s2o.jar into SPSS installation folder (where spss.exe is located) - Call via "java -jar s2o.jar" -
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Arduino Simulator is a software developed to create simulation for Arduino micro-controller. The interface of the main window is straightforward and intuitive, as it is divided into two tabs called Code and Wiring, each with its specific functionality. Arduino Simulator features touch sensor, LED blinking, 4x4 Keypad, One Digit Seven Segment Display, Serial Monitor to display the output of the code, Wiring to show how to make wiring, Hardware requirements that list the components of the...
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oasis-genomics
Oasis Genomics cancer omics integration portal
OASIS is an application that enables complex analytical queries across somatic mutations; copy number changes (CNV); and gene expression data. OASIS has been built on top of the BIoMart frameworks and has been extended to incorporate unique tools and visualizations to facilitate analysis of complex cancer "Omics" datasets. -
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This is a parser in Java for Lisp S-expressions. An S-expression or sexp (for symbolic expression) is a convention for representing data using parentheses.
