Showing 5215 open source projects for "java"

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  • 1
    MSqBAT

    MSqBAT

    Label-free protein quantification for LC-MS

    ...It’s main features are 1) Label-free, MS1-based quantification 2) Support both LC-MALDI-MS- as well as LC-ESI-MS data 3) Supports both GeLC-MALDI-MS- and GeLC-ESI-MS data 4) Convenient, graphical user interface Acknowledgements The development of MSqBAT is kindly supported by YourKit Java Profiler.
    Downloads: 0 This Week
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  • 2
    Maui

    Maui

    Maui is the Maltcms User Interface

    Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas.
    Downloads: 0 This Week
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  • 3
    MorseClusterSolver

    MorseClusterSolver

    The program is designed to search for clusters global minimum structur

    The program is designed to search for clusters global minimum structures of Morse clusters.
    Downloads: 0 This Week
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  • 4
    Pyramid Calc

    Pyramid Calc

    Simple calculator

    Simple and fast in use scientific calculator. More details in README. It's not that long.
    Downloads: 0 This Week
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  • 5
    Welsh Natural Language Toolkit
    ...The WNLT project delivers four core NLP modules; a) Word Segmentation for separating text into words b) Sentence Boundary Disambiguation for finding sentence boundaries c) Part of Speech Tagger for determining the part of speech of each word d) Morphological Analyser for identifying the root form (lemma) of words. The modules are written in JAVA and ‘wrapped’ for execution under the General Architecture for Text Engineering (GATE) framework. The project also includes CYMRIE an adapted version for Welsh of the GATE - ANNIE Named Entity Recognition (NER) application for a range of entities such as Persons, Organisations, Locations, and date and time expressions. Version 2.x The CYMRIE pipeline is accessible via a API, standalone GUI and CLI. ...
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  • 6

    CalcoloCombinatorio-Java

    Un semplice programma in Java per il calcolo combinatorio

    Un piccolo tool in java per effettuare calcoli combinatori come: -Disposizioni -Permutazioni -Combinazioni Calcolo Combinatorio Java
    Downloads: 0 This Week
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  • 7
    CSV Comparator

    CSV Comparator

    CSV Comparator is a tool for comparing files which contain CSV-Data.

    CSV Comparator is a tool for comparing files which contain CSV-Data. It was created for performance engineers to be able to have a easy way to compare data from two testruns and be able to automate the comparing process of various files with scripts. There is a command line tool as well as a user interface. In case you need to compare .xml-Files you can convert them to .csv-Files with my other project CSV Transformer. The advantages by using CSV as input and output are the...
    Downloads: 3 This Week
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  • 8
    CSBB-v2.0

    CSBB-v2.0

    Computational Suite for Bioinformaticians and Biologists

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX and Windows platforms. Currently CSBB provides 16 modules focused on analytical tasks like normalization, visualization, statistics, RNA-SEQ etc.
    Downloads: 0 This Week
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  • 9
    montyhall2

    montyhall2

    Monty Hall Problem (command line)

    Monty Hall Problem (command line), written in pure C++, using Visual C++6. It uses another project of mine for random number generation (glhlib - Graphics Library Helper). I also added a JAVA version. The Java version is written with NetBeans. I assume you can get yourself any IDE and compile the .JAVA file. It runs on Windows, Linux, Mac OSX, whatever.
    Downloads: 0 This Week
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  • 10

    RDRPOSTagger

    A Rule-based Part-of-Speech and Morphological Tagging Toolkit

    RDRPOSTagger is a robust, easy-to-use and language-independent rule-based toolkit for Part-of-Speech (POS) and morphological tagging. RDRPOSTagger obtains fast performance in both learning and tagging process. RDRPOSTagger also achieves a very competitive accuracy in comparison to the state-of-the-art results. RDRPOSTagger now supports pre-trained POS and morphological tagging models for Bulgarian, Czech, Dutch, English, French, German, Hindi, Italian, Portuguese, Spanish, Swedish, Thai...
    Downloads: 0 This Week
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  • 11
    Analog Insydes is a Mathematica toolbox for symbolic analysis of analog electronic circuits. This project provides a set of free add-ons to Analog Insydes, including a Java front-end and a native netlister for Cadence's Analog Design Environment (ADE).
    Downloads: 1 This Week
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  • 12
    CalclipseMath

    CalclipseMath

    Java math expression parser and script interpreter

    CalclipseMath – CalM for short – is a math parser written in Java. With a few lines of code CalM enables your application to evaluate user-supplied mathematical expressions, such as "e^(sin .25pi)" and "(sqrt e)^(sqrt 2)". The standard configuration of the parser has a wide variety of mathematical operations, ranging from basic arithmetic, trigonometry, combinatorics, linear algebra and more.
    Downloads: 0 This Week
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  • 13

    VeriSiMPL

    Verification via biSimulations of Max-Plus-Linear models

    ...The generated LTS is exported to the NuSMV language. As such, it can be fed, along with a specification of interest, to the NuSMV model checker. If you are more familiar with JAVA language, we suggest you to try VeriSiMPL version 2.0 which is fully based on JAVA. If you are more familiar with MATLAB language, we suggest you to try VeriSiMPL version 1.4 which is fully based on MATLAB.
    Downloads: 0 This Week
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  • 14
    DORY

    DORY

    For mining KASH proteins (SUN domain-interacting proteins)

    DORY is a java program developed for searching KASH protein in large protein databases (in FASTA format). DORY is upgraded to DORY2. DORY2 required BLAST+ to run. ***Please make sure BLAST+ is installed on your computer.*** Please see the following publication for detail: Zhou X, Graumann K, Wirthmueller L, Jones JDG, Meier I (2014) Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants.
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  • 15

    Elexis Praxisprogramm

    An Eclipse RCP program for all aspects of a (Swiss) medical practice

    An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work. A fully functional version may be downloaded via http://download.elexis.info/3.1.0. Users may optionally include a demo database to have a playground for experiments. See also http://wiki.elexis.info/Installation_Elexis_3.0_OpenSource Elexis 3.1.0 was released...
    Downloads: 1 This Week
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  • 16
    bel_fft

    bel_fft

    FFT co-processor in Verilog based on the KISS FFT

    ...So far AMBA AXI, Altera's Avalon bus and the Wishbone bus are supported. However, bel_fft's architecture allows an easy adaptation to further bus architectures (e.g. AMBA AHB). It comes with a Java wizard to configure the co-processor and to generate all required files (e.g. twiddle ROMs). It comes with integration into Xilinx Vivado, EDK, and Altera QSYS and includes example designs for Xilinx Zynq and with PCI-Express core (including Linux driver and application). bel_fft is distributed under the GNU Lesser Public License 2.1.
    Downloads: 0 This Week
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  • 17
    BOWS

    BOWS

    Bioinformatics Open Web Services

    BOWS is a generic system based on Web Services which allows programmatic access to applications running on HPC clusters. BOWS allows incorporation of several independent applications since programmers can install them in HPC clusters in any programming language. The lonely requirement is to write a script named “arrow” which calls BOWS back-end services periodically in order to check for new processes and their required parameters. If a new process is found, the “arrow” script should change...
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  • 18
    MELTING is a software to compute, for a nucleic acid duplex, the enthalpy and the entropy of the helix coil transition and then the melting temperature. Four types of hybridization are possible : DNA/DNA, RNA/RNA, RNA/DNA and mRNA/RNA.
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    Downloads: 1 This Week
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  • 19

    Adele

    Adhoc Data Exploration - Live & Easy

    Adele was developed to simplify the daily work with data. Use it as a swiss knife to fill the gap between your work with spreadsheet application like MS Excel and enterprise servers like SAP ERP. Specialized tools like Rapid Miner, KNIME or similiary stuff should not be replaced. But Adele is designed for business people working with spreadsheet applications to analyse their data. There are many technical concepts in an easier way included. For example realtime OLAP, transformations,...
    Downloads: 0 This Week
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  • 20
    Simple-Scrape is a simple web-scraping library that allows for programmatic access to HTML code. No further techniques are needed and the library is very compact and thus easy to use.
    Downloads: 0 This Week
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  • 21
    Assists users to analyse and select players in Australian Football League (AFL) based football fantasy competitions. Displayed in a Java Swing GUI, users can sort and filter players based on many statistical categories.
    Downloads: 0 This Week
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  • 22
    VBS for Research on the Internet

    VBS for Research on the Internet

    Welcome to the Volunteer-Based System for Research on the Internet!

    Welcome to the Volunteer-Based System for Research on the Internet! This system is designed to provide detail data about applications used in the Internet. This information can be used for: - obtaining the knowledge which applications are most frequently used in the network - providing the users some basic statistics about their Internet connection usage (for example for which kinds of applications their connection is used the most) - creating scientific profiles of traffic generated...
    Downloads: 0 This Week
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  • 23
    BioFace is simple software for editing and analyzing DNA, RNA, and protein sequences that is written in Java using SWT and JFace as libraries. Opening GenBank, FASTA, EMBL, or simple sequence files and analizing these sequences can be done.
    Downloads: 0 This Week
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  • 24
    Lattice Miner is a data mining prototype for creating, visualizing and exploring concept (Galois) lattices. It allows the generation of formal concepts and association rules.
    Downloads: 0 This Week
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  • 25
    Maroc

    Maroc

    Software para la Medición Automática de la Oscuridad del Cielo

    Aplicación para facilitar la toma de datos del nivel de oscuridad del cielo nocturno usando un SQM-LU y aplicando las directivas establecidas por la SEA en el proyecto NIXNOX. La aplicación se conecta via TCP/IP a una raspberry pi que controla tanto un brazo robot como el SQM-LU. Las instrucciones para configurar la raspberry pi estarán disponible en breve en: http://www.luz-cero.es/maroc
    Downloads: 0 This Week
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