JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)
TouchGraph provides a set of interfaces for graph visualization using force-based layout and focus+context techniques. For now only older code is available, but we are planning to release new versions as well.
Portable Ubuntu Linux for Scientific Computing
Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated. https://sourceforge.net/projects/portable-linux/files/ Installation 1. Download the Wubi installer http://releases.ubuntu.com/saucy/wubi.exe 2. Install any flavor of Ubuntu. 3. Swap out the root.disk with the ones provided here. Overview LAMP stack running on localhost (127.0.0.1). Scientific, productivity & media packages include R (Rattle Data Miner), GridEngine, Condor, cooperative computing tools, WINE, LibreOffice, Evolution, Clinica, Neuro Debian Desktop, PsycoPy, OpenVibe, 3DSlicer, Paraview, Openshot. Cheers, Gregory Remington
Flora-2 is a powerful knowledge representation and reasoning system designed for building knowledge-intensive applications. It is based on F-logic, HiLog, Transaction Logic, and also supports defeasible reasoning. Applications include intelligent agents, Semantic Web, ontology management, and more.
Java based astronomical logging software which stores it's data in a free and open XML based format (OpenAstronomyLog).
Modelio-Open is a project hosting a set of open source extensions (SoaML, SysML and UML Testing Profile) for a previous version (1.2) of the Modelio Free tool . Currently, the lastest version (2.x) of Modelio modeling and generation tool is available at http://modelio.org/downloads/download-modelio.html. All extensions are downloadable at http://forge.modelio.org/projects.
libCL is an open-source library for high performance computing in OpenCL. The goal is to provide a comprehensive repository of parallel algorithms and data structures for visual-centric computing.
Analyze the network carateristics like Delay, Jitter, Packet loss etc.
This software is a very simple network analyzer. When you click the start button, it will send a configurable stream of UDP packets to a host. (The receiving host is then required to echo all the packets back to the sender, which can be easily done via iptables rule under linux). Once the eched packets arrives back to the sender, the analyzer will calculate all the related statistics like, packet loss, jitter throughput etc... NOTE: in order to receive the echo packets you must configure the receiving host to echo the incoming packets. In the next release i will provide another java application that just echo on an UDP port.
MathTools is an aid in preparing printed math tests.
Matt's MathTools is a Java application designed as an aid in preparing printed math tests. It is easily embedded in other Java applications or it can be used alone as a single-user desktop app. It includes a scripting environment, numerous demonstration classes and several general utilities. A scripting tutorial is also available.
This project provides a JAVA library and a graphical user interface which implement the "FastICA" algorithm based on the paper "Fast and Robust Fixed-Point Algorithms for Independent Component Analysis (ICA)" by Aapo Hyvärinen.
JTreeMap is a Swing Component which represents a tree structure with rectangles (a TreeMap. See http://www.cs.umd.edu/hcil/treemap/). KTreeMap is the SWT component for treemapping (see http://en.wikipedia.org/wiki/Treemapping). It is an Eclipse plugin.
Add more statistical functions to MySQL.
"Statistics for MySQL" provides additional statistical functions (like Pearson's coefficient of correlation) which are missing in MySQL. DLLs for 32 and 64bit Windows as well as makefiles for Linux are available.
Bottwi is an artificial intelligent bot for the world awarded social network: Twitter.
UDP Packet Generator (Stream generator)
Very basic UDP traffic generator. Works with a packet receiver to control the network status as Bandwidth, RTT, jitter, Loss % etc etc... Set Source Address, Destination address - Port Packet Size Stream Bandwidth And press start Command Line interface available java -jar JPacketGenerator.jar srcAddress srcPort dstAddress dstPort bitRate_bps All parameters are mandatory and with parameters the generator require no GUI or windows manager to work. If The project will be useful I'll post some more detail or helps about the usage.
The classic intelligent role playing game
Tower of Zaldagor is a roleplaying game (RPG) where you need to use your wits and skills to complete challenges. Blade Kahn, a king of Sonthalas, has lost his daughter to the Great White Dragon: Zaldagor. She has been kidnapped by humanoids. You have been picked among the elite to return his daugther safely. Engage into an epic story where Gods change the future and demons interfere with the present. Download and discover the beginning of an epic story. The Android version is now available! Find it here: http://market.android.com/details?id=toz.android See a promo video here: http://www.youtube.com/watch?v=Rh7GGlk5m30 Follow Sarquah on Twitter about the development: http://www.twitter.com/sarquah87
JMatLink connects Java and MATLAB. Native methods make it possible to use MATLAB's computational engine inside your own java applications.
Jamocha is an open source rule engine. The objective of Jamocha is to provide a high quality rule engine and expert system shell environment. We would provide you an engine, the required development tools and a best practice methodology.
Java wrapper for native VISA library and TDS3000 oscilloscope driver
Write VISA instrument drivers in Java for Windows and Linux. Maybe the best way to give a full description is to explain the history of this project. History: This instrument driver project is part of of a non open source data acquisition and analysis project used at Colorado School of Mines, JSeisLab. JSeisLab is a Java port of its predecessor "Spectrum Division for Windows" which is written in VB 6.0. Design: I created a 64-bit JNA wrapper with IVI's visa.h version 5.0 as input to JNAerator (https://github.com/nativelibs4java/JNAerator). Instrument drivers written in Java can use this wrapper. A 64-bit VISA library from either an instrument company (e.g. National Instruments, Tektronix) when running Windows or libvisa (http://www.librevisa.org) when running Linux needs to be installed .
One of the most accurate multiple protein sequence aligners
MSAProbs is an open-source protein multiple sequence ailgnment algorithm, achieving the stastistically highest alignment accuracy on popular benchmarks: BALIBASE, PREFAB, SABMARK, OXBENCH, compared to ClustalW, MAFFT, MUSCLE, ProbCons and Probalign.
Java-RFID is a Java programming library for RFID. Its goal is to create an RFID kit-agnostic API ala JDBC. Thus, programmers will write the same code to communicate with any RFID kit. It has been tested with Texas Instruments and Microchip RFID kits.
WYMIWYG KnoBot is a content management system for the semantic web designed to promote the exchange of content with a P2P and reputation based system. The aim is to create a socio-topical space, a perspective dependent space of information and knowledge.
Calculator of matrices for android smartphone.
AnaglyphCanvas3D is library for adding anaglyphs (red-green, red-cyan and so on) to the Java3D programming language. It utilizes the normal Canvas (-3D) class of Java3D and extends it for stereoscopic effects. A prototypic GUI for testing is also ava
Tab2MAGE uses a flexible spreadsheet format for MIAME annotation of microarray experiments. Tab2MAGE spreadsheets may be submitted directly to ArrayExpress, or used to generate MAGE-ML for data exchange.