JMCAD is an program for the modeling and simulation of complex dynamic systems. This includes the ability to construct and simulate block diagrams. The visual block diagram interface offers a simple method for constructing, modifying and maintaining complex system models. The simulation engine provides fast and accurate solutions for linear, nonlinear, continuous time, discrete time, time varying and hybrid system designs. With JMCAD, users can quickly develop software or "virtual" prototypes of systems or processes to demonstrate their behavior prior to building physical prototypes. The user builds his system model by selecting predefined blocks from a block library and simply wiring the blocks together. Each block of the diagram performs a function. Users can also create custom blocks in Java and add them to the JMCAD block library. JMCAD is a block diagram language for creating complex nonlinear dynamic systems.
A pre- and post-processing program for the VASP code
Basic features: 1, Convert POSCAR or CONTCAR to cif or xsf format; 2, Extract the data of DOS and Band; 3, Extract Charge/Spin density (Open with VESTA ); 4, Linear optical properties; 5, Extract Fermi-Surface data; 6, and so on...
Digital Circuits Design and Simulation
Digital Logic Design is a Software tool for designing and simulating digital circuits. It provides digital parts ranging from simple gates to Arithmetic Logic Unit. In this software, circuit can easily be converted into a reusable Module. A Module may be used to built more complex circuits like CPU. The circuit working can be analyzed by using output parts like LEDs, Seven Segment Display and Digital Oscilloscope etc. provided in the software. You can use this software to design Combinational, Synchronous and Asynchronous Sequential Circuits. This Software may be used by professionals, hobbyists and students alike. The teachers may incorporate this software in their courses like Digital Logic and Computer Design, Computer Architecture, Computer Organization and Embedded Systems. In this software, a circuit may be designed using graphical components or may be entered as Sum-of-Product Boolean form.
Mac upgraded to OSX, Lepard which do not support os9 anymore. This project is build to help DNA Strider user to get their data out and perform some basic DNA analyze function.
OpenFlower is a free and open source CFD code (for Linux and Windows) mainly intended to solve the turbulent incompressible Navier-Stokes equations with a LES approach. It can deal with arbitrary complex 3D geometries with its finite volume approach.
An Interactive Visualisation for Tabular Data
TabuVis is a comprehensive visual analysis tool that provides a flexible, customizable and interactive visualization for tabular (or multidimensional) data. It utilizes scatter-plot visualization approach to provide comprehensive and interactive views for different attribute mappings. It provides single scatter-plot and multiple scatter-plots together with Map (GIS) capability. The project is available at: http://staff.scem.uws.edu.au/~vinh/projects/TabuVis/
An easy to install and use toolbox for octave for the calculation purpose of power system along with features like Economic load dispatch, load flow analysis, transmission line parameter and swing equation etc
solves the mathematical expressions with any number of functions in it
It's a scientific calculator which allows users to enter a mathematical expression with any number of functions in it... it evaluates the result and shows the entered expression with the result.... very friendly environment .. easy to use,also compatible with touch screen laptops.. full scientific calculator..
Description and detailed explanation on Fourier Transform, some FFT, LPC etc. Runable project demonstrates DCT transform on continuous audio, show and edit audio source with different zooming and view.
Science Laboratory Inventory and Order Management System
Science Laboratory Inventory and Orders Management System: suitable for school's science laboratories to manage stored items (chemical and equipment) and adds a way to order these items on-line for science lessons and practical experiments. It's PHP/MySQL web application which needs to be installed in one server and runs in any client's browser with no modification at all. It's a multi-user system with different privileges. Demo is available at: http://sciencelabinv.sourceforge.net/demo/
Computer programs for application in Sports science, Physical Culture, among others. By Enrique R.P. Buendía Lozada. firstname.lastname@example.org , Benemérita Universidad Autónoma de Puebla (BUAP), México. (Software without any warranty).
NaruGo is game AI project. Current targets are GO board game and Texas Holdem poker. It investigates Genetic programming to build game AI logic. Also EA/GP simulations for TSP, Graph layout and Prisoners Dilemma problem.
* Model-checking/simulation-checking library for real-time system with dense-time models in C with CRD (Clock-Restriction Diagrams) technology. * Parametric analysis library for linear-hybrid systems in C with HRD (Hybrid-Restriction Diagram) technol
This is an application that computes the date and time in formats appropriate for astronomers - julian date, sidereal time, modified julian date, truncated julian date. Extremely accurate, includes correction for apparent sidereal time.
EDA is Graphical User Interface and Matlab compiled application for filtration of LC-MS or GC-MS, based on probalistic methods. Including peaks and compounds segmentation with various visualizations. This software can be used for metabolomics, proteomics
JPACS, Java Processor and Cache Simulator, was developed to give a simple and clear tool to simulate a processor with a complete associative memory cache at ISA level, using direct memory access or using a program written in assembly.
Binner for assembled metagenomes
The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and differential coverage based binning. It also performs taxonomic assessment of binning quality (via diamond BLASTx). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R, TegetMeyer H (2012) The binning of metagenomic contigs for microbial physiology of mixed cultures. Frontiers in Microbial Physiology and Metabolism 3:410. doi: 10.3389/fmicb.2012.00410
Direct tissue-level image quantification package for Mathematica
ImagingAnalysis is a Mathematica package that performs grid-based analysis of time-lapse imaging data saved in a sequence of TIFF files. This package requires Mathematica 7.0. Revised on 14 May 2017: Bugs are fixed and incompatibility issues are resolved. The current version runs on Mathematica 11.
General purpose scientific framework and its astronomy samples
TIRfinder: A tool for mining class II transposons
To envision the radiation exposure in Neutron Activation Experiments
A software called Activity Predictor is developed using Java TM programming language. The Activity Predictor calculates activities, exposure rates and gamma spectra of activated samples for NAA experiments. The calculation procedure for predictions involve both analytical and Monte Carlo methods. The Activity Predictor software is validated by a series of activation experiments. It has been found that this software calculates the activities and exposure rates precisely. The software also predicts gamma spectrum for each measurement. The predicted spectra agreed partially with measured spectra. This software has a XML database which includes nuclear data for frequently used materials in NAA. Neutron Neutron cross section data from ‘‘ Tables for Neutron Activation Analysis’’ , photon cross section data from Berger and Hubbell’s XCOM photon cross sections database [ 2], and isotope decay from from Lund/LBNL database are included in this database.
An extensible development framework for roleplay games.
Based on the OGL (open gaming licence) specification by d20 Games. Its aim is to one day be a Java 7 and XML source library for building completely extensible gaming engines and libraries. It's in an early stage of development. It is experimental and stability does fluctuate. There are a few toys to play with for advanced programmers but there is little for end users at this time. The current working set is on CVS branch 'v0.0.3' I hope to merge back on trunk soon.
Major looseless compression algorithms library and documentation. First project: Arithmetic, Huffman, LZ77, LZ78, LZW, RLE. Second project reimplements Deflate. Documentation explains major Entropy Compression Methods.
A software tool enabling the user to browse through an image stack created by a confocal microscope. Points can be plotted through the stack, producing a digital 3D representation, which can be viewed in 3D and compared with other plots.
This software is a Perl Catalyst based electronic lab notebook (ELN) aiming for small biologic laboratories, that have no funding to invest into a closed source ELN.