BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
This Project Aims To Port Various Open Source Software Onto Stratus Open VOS Architecture. Please Refer The Following URLs For More Information On The Architecture. http://www.stratus.com http://www.openvos.com
Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
Portable Ubuntu Linux for Scientific Computing
Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated. https://sourceforge.net/projects/portable-linux/files/ Installation 1. Download the Wubi installer http://releases.ubuntu.com/saucy/wubi.exe 2. Install any flavor of Ubuntu. 3. Swap out the root.disk with the ones provided here. Overview LAMP stack running on localhost (127.0.0.1). Scientific, productivity & media packages include R (Rattle Data Miner), GridEngine, Condor, cooperative computing tools, WINE, LibreOffice, Evolution, Clinica, Neuro Debian Desktop, PsycoPy, OpenVibe, 3DSlicer, Paraview, Openshot. Cheers, Gregory Remington
The road cutting and filling quantity analyser and report producer app
Earthworks is a civil engineering related cutting and filling quantity calculator. It also generates reports in various formats of CSV and PDF. It takes the basic paraments to form the longitudinal section of the road along with the proportions ratio of cuttings and fillings. ================================= V 1.2: 1. Now creates the longitudinal section in CAD softwares. 2. Bug Fixes. ================================== V 1.1: 1. Application freezing, not opening bug fixed. 2. Application closing error fixed. ================================== ======================================= SYSTEM REQUIREMENTS ======================================= Windows: 7/ 8 / 8.1 / 10 (Please note, the ARM version of Windows is not supported for now.) Processor: Intel Pentium 4 or later that's SSE2 capable Ram: 512MB (Min) Architecture: Both x86 and amd64 (x64) binaries are provided for Windows.
Old versions of the interpreter.
This is a new math-oriented programming language. Designed by the mexican industrial engineering student Alan Zatarain and released to the public under the common free-software license.
A Haskell implementation of the Three Man morris game together with an AI for playing against the Computer. Command line based, needs Haskell interpreter.
* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values (possibly obtained from VEGAS or GATES) and outputs pathway gene sets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * IMPORTANT NOTE: -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX OR MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA. * UPDATE NOTE: -> Mar-7-2018: revise header terms in the output file (all versions) -> Jan-8-2018: minor output format update for all versions -> Apr-3-2017: MacOSX command-line version is added. It also provides the PPI net summarization -> Mar-31-2017: Linux and Windows command-line versions now provide the PPI net summary results (except the net visualization)
Open, free and extensible plataform for developing robotics projects
Data Compression Simulator for E-Learning:
Data Compression Simulator for Text, Sound, Images and video-clips. Variable Data Compression methods could be applied. Simulators has a web client for E-Learning. It is focused for students and data compression interests., Project Initiator Dr. The Anh Vuong (Admin)
Neural Network with Neurons with Multidimensional Activation Function.
Fully Connected Neural Network with Neurons with Multidimensional Activation Function.
Visualization of lerning process of hypercube neuron with two inputs.
Simply and powerful programming language.
Neural Network with Hypercube Neurons.
This is a multi-threaded Java program that tries to maximise CPU utilization by separating and distributing the computational part of the work from the file reading and writing part by using separate threads.
The NSPI Project (Natural Sciences and Physics Institute) is an research software consortium and hardware design project to capture and analyze information in various disciplines including agriculture, electricity, energy, and paranormal investigations.
Software application, firmware and U.I. for 4-motors 3-axis milling machine, open hardware, software and mechanics. See also project in details for schematics and images on http://www.contesti.eu/opensource/xyz-dc-motor-controller
A simple program that solves linear equation systems. As of now only numerical coefficients are supported. The program is very simple and not suited for big matrices, since it uses laplace's method.
is a chat robot for help webbrowser.