Portable Scientific Python 2/3 32/64bit Distribution for Windows
WinPython is a free open-source portable distribution of the Python programming language for Windows XP/7/8, designed for scientists, supporting both 32bit and 64bit versions of Python 2 and Python 3. Since September 2014, Developpement has moved to https://winpython.github.io/
SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
JAGS is Just Another Gibbs Sampler. It is a program for the statistical analysis of Bayesian hierarchical models by Markov Chain Monte Carlo.
BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
GeographicLib is a small set of C++ classes for converting between geographic, UTM, UPS, MGRS, and geocentric coordinates, for gravity (e.g., EGM2008), geoid, and geomagnetic field (e.g., WMM2010) calculations, and for solving geodesic problems. For documentation, visit https://geographiclib.sf.io
A cross-platform, open-source, alternative to NIST REFPROP. Based on reference-accuracy equations of state and transport property correlations for refrigerants like Water, CO2, R134a, Nitrogen, Argon, Ammonia, Air, R404a, R410a, Propane and many others. A selection of secondary working fluid properties are also available. Can also make use of REFPROP when available. In addition, calculations for Humid Air Properties based on ASHRAE RP-1485 are provided. Wrappers are available for MATLAB, Octave, Python, C#, Fortran and many more.
JabRef is a graphical application for managing bibliographical data
JabRef is a graphical application for managing bibliographical databases. JabRef is designed specifically for BibTeX bases, but can import and export many other bibliographic formats. JabRef runs on all platforms and requires Java 1.8 or newer.
Yabe - Graphical explorer program for BACnet devices - C# code
Graphical explorer program written in C#, for browsing BACnet devices. Currently supports both BACnet IPv4, IPv6 + BACnet MSTP + BACnet PTP + BACnet Ethernet. Basic functions for read, write, read multiple, write multiple, iam, whois, subscribeCOV, notify, WriteFile, ReadFile etc. Includes three demo server applications : a generic server, a wall mounted room controller simulator, a weather server (gets data from an Internet webservice). Includes a lot of samples C# source code. Raspberry Pi server sample code, also tested on Beaglebone & Intel Edison. Bacnet/Mstp capture tool (only Wireshark and an Rs485 adaptor are required) See Readme.txt for more information. Developers/Contributors team : Morten Kvistgaard (2014-2016), Frédéric Chaxel (2015-2018), Adam Guzik (2015), Christopher Günther (2015), Thamer Al-Salek (2016)
ScadaBR is a SCADA (Supervisory Control and Data Acquisition) system with applications in Process Control and Automation, being developed and distributed using the open source model.
APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>. Please register at http://goo.gl/LGVU5j before downloading!
UrJTAG aims to create an enhanced, modern tool for communicating over JTAG with flash chips, CPUs, and many more. It is a descendant of the popular openwince JTAG tools with a lot of additional features and enhancements.
Stand-alone application and Python tools for interactive and/or batch processing analysis of X-Ray Fluorescence Spectra. Graphical user interface (GUI) and batch processing capabilities provided.
open Transportation Control System
openTCS is a platform-independent transportation control system (TCS) intended to manage fleets of automatic guided vehicles (AGVs), but can be used to manage virtually any automatic vehicle. It consists of an abstract kernel that implements replaceable algorithms and strategies (computation of routes, dispatching of orders to vehicles, scheduling of resources etc.), pluggable vehicle drivers that implement communication protocols and a graphical frontend for creating and visualizing logical models of areas the vehicles are moving in.
high-performance nonlinear least squares solver for graph problems
SLAM++ is a minimalist implementation of incremental nonlinear least squares, containing lighting fast implementation of linear algebra on sparse block matrices. It is aimed for use in 3D reconstruction or robotics.
Tevo Tarantula 3D printer
Welcome to the my3D printer Tevo Tarantula site. Here you find find firmware, upgrades, modifications and new parts to make your Tevo Tarantula even better. Full users guide taking you from once assembled to printing. Step by step detailed instructions.
jMetal is an object-oriented Java-based framework for solving multi-objective optimization problems with metaheuristics.
IDA Pro plug-in to fix/extract/view RTTI information
An IDA Pro Windows object RTTI vftable finder, fixer, and lister plug-in. Places structure defs, names, labels, and comments to make more sense of class and structure vftables ("Virtual Function Table"). Lists found RTTI structures and C++ classes in a window for browsing. Mentioned in Chris Eagle's: "The IDA Pro book": https://www.nostarch.com/idapro2.htm See: http://en.wikipedia.org/wiki/RTTI * May 2017: Improved data segment scanning * Requires IDA Pro 6.9 or greater. To build you'll need MSVC 2015 and https://sourceforge.net/projects/ida-support-library/
Synergy analyses of drug and other other agent combinations
Combenefit software is a standalone application for Windows that performs surface analyses of drug and other agent combinations to identify synergy. Please cite as: "Di Veroli,G.Y. et al. (2016) Combenefit: an interactive platform for the analysis and visualization of drug combinations. Bioinformatics." (http://bioinformatics.oxfordjournals.org/content/early/2016/05/27/bioinformatics.btw230.abstract) Current version (2.021): https://sourceforge.net/projects/combenefit/files/Combenefit%202.02%20WIN_64%20%28PREFERRED%29/ Older version for 32-bit os: https://sourceforge.net/projects/combenefit/files/WIN_32/ Quick user's guide: https://sourceforge.net/projects/combenefit/files/Combenefit_v2.02_quick_guide_v1.03.pdf/download Examples: https://sourceforge.net/projects/combenefit/files/Examples/ Template file: https://sourceforge.net/projects/combenefit/files/REPLICATE_TEMPLATE.xls/download
C++ library for half precision floating point arithmetics.
This is a C++ header-only library to provide an IEEE-754 conformant half-precision floating point type along with corresponding arithmetic operators, type conversions and common mathematical functions. It aims for both efficiency and ease of use, trying to accurately mimic the behaviour of the builtin floating point types at the best performance possible. It automatically uses and provides C++11 features when possible, but stays completely C++98-compatible when neccessary.
Graphical explorer, browser for EtherNet/IP™ network
Ethernet/IP Explorer/Browser written in C#. Partial ODVA Common Industrial Protocol : UCMM messages today. Shows devices on the local network. Displays the classes, instances, attributs. Decodes values using standard decoders and also ones defined by the user. WriteSingle raw data into attributs. Can send ForwardOpen for T->O and T->O data exchange. Full open source code. UCMM & Class 1 basic client source codes. EtherNet/IP™ is a registered trademark of ODVA, Inc.
The Corporate Bullshit Generator is a high-performance random text generator that is focused on corporate bullshit. It is able to produce, per second, 400 A4 full pages of inspired sentences like "Our turn-key branding strategy drives corporate, scalable, wide-ranging and profit-oriented idiosyncratic incentives."
Genetic variants discovery tool
Bioinformatics pipeline for discovery of genetic variants from NGS reads.
NMR spin dynamics simulation
Insensitive (Incredible Nuclear Spin EvolutioN SImulation Tool Intended for Visual Education) is an application to simulate the NMR experiment based on the quantum mechanical density matrix formalism. It is available for Mac OS X 10.6 and above and iOS 5.1.1 and above. Please refer to the paper published in Concepts In Magnetic Resonance, 2011, 38A (2), 17-24.
Open-source cross-platform spectrometer device driver
SeaBreeze is a device driver library that provides an interface to select Ocean Optics spectrometers. It is written in C/C++ and builds and runs on Windows (XP/7/8), MacOSX, and Linux (x86/x64/ARM).