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The High Throughput Sequence Analysis Pipeline uses freely available bioinformatics tools from NCBI, Phylip, EMBOSS and clustalw to identify and group closely related DNA samples. It can be run on *Nix systems linearly or in parallel using the SGE.
Research code for audio- and video- based processing of multi-modal corpora, for human-computer-interface tasks and computer-assisted video interpretation.
Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex compounding or character encoding. Hunspell interfaces: Curses, Ispell compatible pipe interface, OpenOffice.org UNO module944 weekly downloads
Music classification Algorithm Development. Automatic classification of audio files using Support Vector Machines.
“JEDI Math” is a free mathematical library developed under the MPL for Delphi, Kylix, FPC and Lazarus. The library provides routines for matrices/vectors, regression, geometry, physics, equation rendering and raytracing among others.5 weekly downloads
Remember when you wrote your games in Pascal? Well continue that fine tradition by using JEDI-SDL! Which works with Delphi, Kylix, Free Pascal, Gnu Pascal and TMT Pascal. Cross-platform game develpment has never been easier!59 weekly downloads
JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included.172 weekly downloads
The JMX Extension package provides the capability to manage selective Protégé OWL API remotely using the JMX library. This package allows distributed software components to retrieve, contribute, and reason about information in single OWL ontology.1 weekly downloads
JTransforms is the first, open source, multithreaded FFT library written in pure Java. Benchmark results show better performance than FFTW. The latest version is available at http://github.com/wendykierp/JTransforms.71 weekly downloads
Integration of <A href="http://jade.cselt.it">JADE</A> with <A href="http://herzberg.ca.sandia.gov/jess">JESS</A> and <A href="http://protege.stanford.edu">Protege-2000</A> using the <A href="http://www.ida.liu.se/~her/JessTab">JessTab</A>1 weekly downloads
A plug-in for the Protégé ontology editor and knowledge-engineering framework that allows you to use the Java Expert System Shell (Jess) and Protégé together.1 weekly downloads
Jitterbit is an open source integration tool that delivers a quick and simple way to design, configure, test, and deploy integration solutions. It supports many document types and protocols: XML, web services, database, LDAP, text, FTP, HTTP(S), file34 weekly downloads
K is a C++ library featuring Genetic Programming, cryptography, 64 bits arithmetic, cross-platform macros and unicode conversion routines. It compiles on NewtonOS, Mac < X, Unix and Windows and it makes little use of C++ templates.1 weekly downloads
An IDE with compiler & upload/download for the Velleman K8001 kit. Replaces the original Velleman compiler, because it doesn't work in WIN32
D. R. Kaprekar found an interesting behaviour of four-digit number (say, 6349). Take any number; sort its digits in ascending (3469) and descinding (9643) order; subtract these (9643 - 3469 = 6174). Repeat these steps a couple of times. Surprisingly, you'2 weekly downloads
The Knowledge & Language Acquisition Model (KLAM) will be a modular and useful software package based on psycholinguistic research and A.I. methods used to efficiently learn to comprehend (and maybe generate) natural language in a holistic manner.
Knowtator is a general-purpose text annotation tool that is integrated with the Protégé knowledge representation system. Knowtator facilitates the manual creation of training and evaluation corpora for a variety of biomedical language processing tasks.54 weekly downloads
Portable software system to manage electronic laboratories
MAPONTO is an interactive tool for discovering semantic mappings between database schemas and ontologies as well as between different database schemas. The tool analyzes semantics in the input schemas and ontologies for generating semantic mappings.3 weekly downloads
MapWindow GIS is an open source geographic information system (GIS) that includes a set of vector and raster data visualization and analysis components as well as an end-user Windows GUI which can be extended through plug-ins. www.MapWindow.org.
Mars Eva Computing Environment is a JMF, JINI project that is used to provide a collaborative mission planning & execution environment for furture teams on Mars. This effort is part of a simulation for the Mars Society of Australia.1 weekly downloads
MeterMason is a GUI for designing meters and gauges.
A tool to support data-analysis on a Oracle-DB. In Greek mythology, Metis (Μῆτις) was of the Titan generation ... The Stoic commentators allegorized Metis as the embodiment of "wisdom" or "wise counsel" ... (from Wikipadia)6 weekly downloads
Microarray Explorer (MAExplorer) is a Java microarray data-mining bioinformatics program. It includes data management, graphics, statistics, clustering, reports, gene data-filtering, user written MAEPlugins, documentation, tutorials, demo data.24 weekly downloads