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sequence/structural analysis programs
Fast and robust map analyser for Brood War.5 weekly downloads
Balefire is a cross platform GUI for chess engines.
Tools for genomic analysis5 weekly downloads
Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.8 weekly downloads
The Basil project's mission is to build a parsing and modeling environment where one is able to work with, code in, integrate, and design a wide variety of computer languages.
Built with R, this code allows the user to simulate the game of basketball. While the main focus is on simulating the NBA, the code provides a framework for simulating other leagues by modifying the default set of rules.
Bayes++ is a library of C++ classes that implement numerical algorithms for Bayesian Filtering. They provide tested and consistent numerical methods and the class hierarchy represents the wide variety of Bayesian filtering algorithms and system model6 weekly downloads
Beer Wizard is the possibly temporary title for a piece of software being developed for members of the Craft Beer community.
NOTE: developement of this project has moved to GitHub http://github.org/matthuska/biasviz/ BiasViz is a Java applet for visualization of amino acid bias in multiple sequence alignments.
BigBang/Horizon is a proteomics data analysis pipeline with focus on the shotgun LC/MSMS workflow.
If you manage phylogenetic data, Bio::NEXUS can make your life easier with a library and ready-made tools to manipulate and visualize NEXUS files (see http://www.molevol.org/nexplorer and http://search.cpan.org/dist/Bio-NEXUS/doc/Tutorial.pod).
BioBuilder was a framework for building protein-centric databases using the Zope2. It's not maintained anymore. If you want to have a look to the latest snapshot of the code you can get it at http://biobuilder.sourceforge.net/ Contact us if you want to
It moves by itself inside networks like virus infection & plagues, it is being written to solve computer virus problem drastically and responsibly. It is legal, free and open for public domain to improve W3 ICT Security.
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller16 weekly downloads
BitMagic - C++ library implementing dynamic bitvectors and bit-set algorithms with several types of on-the-fly, adaptive compression. Designed for use in databases, search systems, data-mining algorithms, scientific projects.1 weekly downloads
Highly efficient implementation of BLAS for sparse block matrices.
Body Mass Index (BMI) Calculator
A Java library for encoding pseudo-Boolean constraints into CNF formulea.
BoomBot is a developer's framework for writing a bot connecting to the AIM network. It manages the network communication for the bots so that they can be easily written without worrying about AIM itself at all. Bots can be written in Objective-C or Lua.
BrainFlux is a pet project to teach physics and math the right way -- giving a visual, conceptual understanding. This software includes fast and educational code for simulation and visualization of things like relativity and quantum mechanics.
Brainbot is a general purpose robotics research platform, with an onboard PC. Brainbot's development was funded by the Brain Engineering Lab, the Neukom Institute, and HUV, Inc.
Brainiac, Is C/C++ Libraries, Programs, And Python, And Lua Scripts For Neural Networking And Genetic Programming, In An Attempt To Create A "Glue-It-All-Together" Project, Striving Towards General Artificial Intelligence1 weekly downloads
BuddyScout is an interface between BuDDy (Binary Decision Diagram library) and GHC (Glasgow Haskell Compiler). It enables you to use the BDD library from within Haskell programs.
BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.822 weekly downloads