Scientific/Engineering Software

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Scientific/Engineering Software

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  • 3D Aplication Logging State System

    The intent is to create a sort of virtual 3D environment representing the exact application state in real time of common Java server application, as web application or client/server application too.

    Downloads: 0 This Week Last Update: See Project
  • CloudBurst

    CloudBurst is a parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes, for use in a variety of biological analyses including SNP discovery, genotyping, and personal genomics.

    Downloads: 2 This Week Last Update: See Project
  • SIRS

    SIRS stands for "Smart Indicators for Reflection Support". SIRS is a framework for developing Indicators on top of sensor networks in web-based and ambient environments for data aggregation, information visualization and context adapation.

    Downloads: 0 This Week Last Update: See Project
  • Freeways

    Freeways is a FOSS dedicated club The club maintains: Novice projects: a Sudoku game, a snake game Guides: Using opensource software Advanced projects: GEM: a framework to make game development easier. Modelsim clone: an opensource alternative to m

    Downloads: 0 This Week Last Update: See Project
  • LIGR Assembler

    LIGR Assembler is a sequence assembly program. It was derived from TIGR Assembler and addresses some of TIGR Assembler's shortcomings. See the CHANGES file for details.

    Downloads: 0 This Week Last Update: See Project
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  • phpSWOT

    From project management to general decision making, SWOT is a key tool. Lack of packages (specially Open Source) driven me to create a multiplatform tool, using available, free resources.

    Downloads: 0 This Week Last Update: See Project
  • Scratchworks

    An information engineering multi-tool, useful for debugging, security work and other tinkering endeavors. With an open plugin architecture, it can be easily extended to provide hours of fun.

    Downloads: 0 This Week Last Update: See Project
  • BIOperl Scripts for PHylogenetic Analyse

    Biospha is a suite of perl scripts based on bioperl toolkit intended to help researches to manage large sequence file. With BIOSPHA you can classify each sequence according to the NCBI taxonomy. You also can get all taxonomic info from a GI or Taxid.

    Downloads: 0 This Week Last Update: See Project
  • BigRedBin

    BigRedBin is a web-based tool designed to pre-process metabolomics data generated by a mass spectrometer in an attempt to increase the signal-to-noise ratio. This is accomplished by using information from multiple technical replicates.

    Downloads: 0 This Week Last Update: See Project
  • PiML

    The Pi Markup Language (PiML) aims at providing an XML based representation format for the description of models encoded in the Pi Calculus. The XML representation of such Pi Calculus models should support model storage, exchange, and coupling.

    Downloads: 0 This Week Last Update: See Project
  • marine-virioplankton

    This is the software that supports the metagenomics analysis for Dr. Shannon Williamson's Marine Virioplankton project.

    Downloads: 0 This Week Last Update: See Project
  • LIMS.NET

    A web-based LIMS developed by .NET tech

    Downloads: 0 This Week Last Update: See Project
  • Chart Gnuplot

    A Perl object-oriented library for plotting graphs with Gnuplot.

    Downloads: 0 This Week Last Update: See Project
  • cdtServices

    Discovering Candidate Services in XML Process Definition Language (XPDL).

    Downloads: 0 This Week Last Update: See Project
  • SimRecommender

    SimRecommender is a modular perl framework to simulate and test attacks on recommender systems. It uses a plug-in architecture to integrate different attacks and recommender algorithms.The development was supported by NSF award IIS-0812042 (see README).

    Downloads: 0 This Week Last Update: See Project
  • Home Automation and Control System

    Home Automation and Control System is a software which can control devices (using pc lpt port) at home from anywhere with any internet enabled device. This software drives a solid state relay by which we can control our home appliances.

    Downloads: 1 This Week Last Update: See Project
  • slclust

    slclust: a utility that performs single-linkage clustering with the option of applying a Jaccard similarity coefficient to break weakly bound clusters into distinct clusters. The slclust utility is written in ANSI C++.

  • Center for Cancer Computational Biology

    This is the public repository for the software being developed by the Center for Cancer Computational Biology at the Dana-Farber Cancer Institute.

    Downloads: 0 This Week Last Update: See Project
  • Harmogene

    Harmonize + gene = Harmogene Efficiently create sets of genome annotations ("consensus annotations") from one or more source genomes using simple rules and and apply those annotations to one or more target genomes. See the Trac page for more info.

    Downloads: 0 This Week Last Update: See Project
  • Devantech I2C to USB Commander

    A Perl script that interfaces with the Devantech USB to I2C interface adapter. This script allows a user to read and write as a master to the i2c bus as well as set or get the value of the io pins.

    Downloads: 0 This Week Last Update: See Project
  • Algorithm::MatchingModel

    Algorithm::MatchingModel is a perl library for running match simulations and statistics for two-sided matching problems. It includes classes for a preference factory, algorithm plug-ins, and gathering statistics between rounds.

    Downloads: 0 This Week Last Update: See Project
  • Simulation Experiment Description ML Icon

    Simulation Experiment Description ML

    SED-ML

    The Simulation Experiment Description Markup Language (SED-ML) is a formal representation aimed at encoding requirements defined in the MIASE guidelines.

    Downloads: 0 This Week Last Update: See Project
  • Ramugen : Random Music Generator

    Ramugen is a music application which assists in / automates composition along stochastic/indeterminate lines. Comes as a Win32 desktop application and a Borland Delphi component-package. Open Source : full source-code and documentation provided. Very fle

    Downloads: 1 This Week Last Update: See Project
  • Strain Ontology

    An ontology comprising of all the rat strains arranged in the OBO format.

    Downloads: 0 This Week Last Update: See Project
  • AiFractals

    This project is result of a challenge "creating a fractals generator by using only C++ and Qt", AiFractals is based on Qt Script and you can enjoy by generating your custom fractals =) by your own algorithms (Qt Script)

    Downloads: 0 This Week Last Update: See Project

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