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SyntenyMiner provides a user interface to navigate matches between multiple genome sequences.
This is a project to develop an open source software for the scientific graphical plotting, analysis of graphs, data simulation etc.
BlueJam is a Java-based algorithmic music composer that uses evolutionary techniques and heuristics. Originally intended to evolve solos on the blues scale. BlueJam interfaces with Pure-Data to give real-time output.1 weekly downloads
Cloudbased voice solutions are common in enterprise networks and frustrating for operations teams to manage. Simplify VoIP monitoring by having a proactive analysis of on-prem, hybrid and UCaaS voice services. Try the ThousandEyes VoIP monitoring solution today, free.Advertisement
The Verilog-Perl distribution provides Perl preprocessing, parsing and utilities for the Verilog Language. It is also available from CPAN under the Verilog:: namespace.
Provides a C++ class that prints floating point numbers in fixed, scientific, engineering, and significant figure formats. Provides the flexibility that standard C++ lacks.
Dogi is a web site to develop green technology inventions to repair the environment. Ideas are brain stormed by everyone, real engineering work is done by collaborating teams, and final products are built by ordinary people.
Designed to help visualize how evolution works, this program will show the camouflage evolution of little polygons to match their background. Polygons will reproduce in slight variations of color and size while the user clicks to "kill" them.
a library which i hope to write to compute high precision aerodynamic and electrodynamic equations
A multi-platform information extraction/ontology population library from HTML documents, written in C++
An information engineering multi-tool, useful for debugging, security work and other tinkering endeavors. With an open plugin architecture, it can be easily extended to provide hours of fun.
BigRedBin is a web-based tool designed to pre-process metabolomics data generated by a mass spectrometer in an attempt to increase the signal-to-noise ratio. This is accomplished by using information from multiple technical replicates.
The Pi Markup Language (PiML) aims at providing an XML based representation format for the description of models encoded in the Pi Calculus. The XML representation of such Pi Calculus models should support model storage, exchange, and coupling.
This program will allow herbavore-like life forms to evolve on a grid. The grid will grow food, and these organisms will evolve to eat the food on the ground, reproduce and compete with other organisms in the same environment.
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A Silverlight framework that makes it easy to develop games and applications simulating creatures that interacts with eachother.
Harmonize + gene = Harmogene Efficiently create sets of genome annotations ("consensus annotations") from one or more source genomes using simple rules and and apply those annotations to one or more target genomes. See the Trac page for more info.
SOESA - Structure Optimization and Evaluation using Separations of Atoms Software for refining low-resolution protein crystal structure or NMR models using atomic distance restraints obtained from a database of known structures.
Our mission is to organize educational materials that have teacher information, exercises, and open source software linked on site. We aim at verfied, validated, and accredited materials, whether software or hardcopy.
An open source toolbox for protein-protein docking with internal backbone flexibility that can be executed on GPU cards, using PyMOL molecular viewer for user interface. Implemented in CUDA with the eventual transition into OpenCL.
PyCharm's debugger is not only one of the fastest available Python 3.6 debuggers, but also able to debug Django templates, and code running remotely, in VMs, and in Docker ContainersAdvertisement
RmiR is an R package for the analysis of microRNA and gene expression microarrays. The package is designed to coupling microRNA and gene expression data, using different databases, like TargetScan, mirBase, picTar,TarBase and others...
A web-based LIMS developed by .NET tech
SimRecommender is a modular perl framework to simulate and test attacks on recommender systems. It uses a plug-in architecture to integrate different attacks and recommender algorithms.The development was supported by NSF award IIS-0812042 (see README).
Outil de saisie et de visualisation des humeurs. Permet aux personnes bipolaires de faire un suivi quotidien et d'avoir le tout sous forme visuelle pour présenter à leur médecin ou simplement pour effectuer un suivi personnel de leurs humeurs.
This is the public repository for the software being developed by the Center for Cancer Computational Biology at the Dana-Farber Cancer Institute.
slclust: a utility that performs single-linkage clustering with the option of applying a Jaccard similarity coefficient to break weakly bound clusters into distinct clusters. The slclust utility is written in ANSI C++.5 weekly downloads
Input/output based on hierarchical variables.