GIRAFFE Data Reduction Software
GIRAFFE Base Line Data Reduction Software is a set of python scripts and modules and a C library to reduce FITS images produced by the Very Large Telescope (VLT) FLAMES instrument.
XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
VisIt is an interactive parallel visualization and graphical analysis tool for viewing scientific data.