enhancements and development for the Vis5d scientific visualization tool, a program to display volumetric datasets in 3+ dimensions.
The 3d Default: One computer room, a utility room, and living space, optional outdoors. The computer room should simulate. Utility-room: 3d-designed actions. Living space for designs andor avatar use.
Weighted Implementation of Suboptimal Paths (WISP)
Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path of correlated motions leading from the allosteric to the primary active site. We present a program called Weighted Implementation of Suboptimal Paths (WISP) capable of rapidly identifying additional suboptimal pathways that may also play important roles in the transmission of allosteric signals. Aside from providing signal redundancy, suboptimal paths traverse residues that, if disrupted through pharmacological or mutational means, could modulate the allosteric regulation of important drug targets.
Wireless LAN (IEEE 802.11) power management extension based on ns-2.33. This supports legacy power save functions defined with IEEE 802.11.
Localisation system in wireless sensor networks using ns-2
This project presents an extension to ns-2, which enables a normal user, who has basic knowledge of ns-2, to simulate localization system within a wireless network. Moreover, this project would be beneficial to researchers who want to implement new or existing localisation algorithms and anyone new to ns-2 who wish to know more about how a simulation project is built and structured. , provide more details. References  A. M. Abu-Mahfouz and G. P. Hancke, GP., “ns-2 extension to simulate localization system in wireless sensor networks,” In Proceedings of the IEEE Africon 2011 conference, 13-15 September , Livingstone, Zambia, 2011, pp. 01-07.  A. M. Abu-Mahfouz "Accurate and efficient localisation in wireless sensor networks using a best-reference selection," PhD thesis, 2011, http://upetd.up.ac.za/thesis/available/etd-10122011-124534/ For ns-2.34: download ns2_localisation.tar.gz For ns-2.35: click on "Browse All Files" then read "readme.asn"
XDAQ is a software platform designed specifically for the development of distributed data acquisition systems. The development is carried out at CERN, the European Organization for Nuclear Research. Please visit http://xdaq.web.cern.ch
A library to process X-ray images from the Heimann imaging system. The XGray library has interfaces to C++ and Tcl and includes the graphical program XRayLab, which is written Tcl.
emXML is a standard for archiving and processing Eye Movement data; it also comes with a set of tools to convert, visualize, edit, and summarize Eye Movement data.
Schematic circuit editor for VLSI and Mixed mode circuit simulation.
Xschem is a schematic capture program, it allows to create a hierarchical representation of circuits with a top down approach . By focusing on interconnections, hierarchy and properties a complex system (IC) can be described in terms of simpler building blocks. A VHDL, Verilog or Spice netlist can be generated from the drawn schematic, allowing the simulation of the circuit. Key feature of the program is its drawing engine written in C and using directly the Xlib drawing primitives; this gives top speed performance, even on very big circuits. I have succesfully managed to simulate complete VLSI projects with this tool, both digital (Verilog / VHDL) and analog (Spice). The user interface is built with the Tcl-Tk toolkit, tcl is also the extension language used to send commands to the program. Schematics can be printed in SVG, PNG, PDF, formats. XSCHEM runs on Linux or other Unix-likes with Xorg server and on Windows with the Cygwin layer and required tools installed.
Ytk is a Tcl/Tk program which adds menus, buttons and features to the basic command line driven Yorick program and language. It also enables usage of all Tcl/Tk widgets and functions including buttons, sliders, checkboxes, and other typical TK widgets to
'Asynchronous General Purpose Interface Buss' for Tcl
This extension adds a new channel type to Tool Command Language that allows for easy and modern communication with devices plugged into a GPIB buss. Linux and Windows friendly.
open source Aerodynamics and 3-D CFD software (RANS, VLES, DNS) for compressible turbulent flows: 1.0.2 version with GUI (mar 2012)
avrLab is an IDE (integrated development environment) for AVR microcontroller from ATMEL. It includes an editor with syntax highlighting. avrLab includes support for macro assembler (tavrasm and avra) as well as support for accessing the AVR via uisp.
Bras is a rules-based command execution system, ala 'make'. It includes a powerful rules system supporting foreign directory triggers, multiple rule types, and on-the-fly dependency generation. It is written in Tcl and uses Tcl as its script language.
decida is [de]vice & [ci]rcuit [d]ata [a]nalysis. It is used for electron device characterization, procedural simulation/analysis of electronic circuits, or more general data analysis tasks.
Various scripts for several EDA tools such as: RTL Compiler, spyglass, lec, temposync, etc. Scripts are useful in IC design.
dna2abc turns DNA sequences into musical sequences. The key feature is the rule editor; a rule is a regular expression paired with a Tcl script. dna2abc scans a DNA sequence, testing each regular expression: if it matches, the Tcl script is run.
A simulated Artificial Intelligence IRC script for use with Eggdrop with many options and features and high configurability, multi-language support, grammar checker, and now with theme support! Database support is up-coming.
Tcl/Tk support for the EPICS control system along with EPICS aware megawidgets.
esweep is a scriptable audio measurement program which features various signals and signal processing functions. Its main purpose is the measurement of speakers.
The main scope of the program is to take Thermo-Calc or Dictra (both registered trademarks) and transform them into nicely formatted encapsulated postscript diagrams, generated by gnuplot. But exp2plt can also be used as a graphical interface to gnuplot.
This project is to implement a kind of educational program which will demonstrate FFT algorithm and help students better understand Fourier transformation.
Genomecomb is a package for the analysis of complete genome data. It can be used to compare, annotate and especially filter the results of complete genome sequencing.
An extension to the Tcl language to allow communication with measurement instruments over the IEEE-488 (GPIB) bus.