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- Programming Language: Perl ×
Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.3 weekly downloads
STATPerl (Statistics with Perl) is a free Statistical Software based on Perl. Perl source codes for various statistical analysis are given with it. User can add new analysis and edit existing one. An inbuilt Perl IDE comes with it.
Middle level device drivers for the Ultraship U-2, a USB HID scale, no brand or company name available. Includes basic test scripts, drivers, example implementations and documentation. The output of this driver will insert it into applications.
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Featurama is a library that implements various sequence-labeling algorithms. Currently Michael Collins' averaged perceptron algorithm is fully implemented.
Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
EdgeExpressDB (eeDB) is a federated data abstraction system designed for integrating, interpreting, and visualizing very large biology datasets. It is designed for scaling beyond Petabytes and 10^13 objects. http://fantom.gsc.riken.jp/4/edgeexpress
Create colorful WiFi signal strength maps from NetStumbler GPS and signal data. Compatible with Google Earth. As far as we know, this is the only dedicated wifi mapper / map generation software currently available under GPL.4 weekly downloads
A free Hebrew spell-checker and morphological analyzer
GKK - GPX KurvenKoeffizientenBerechner. Berechnet aus einer vorliegenden GPX-Datei die Summe der Kurven pro km. Kommandozeilenbasierte Anwendung.
ProteoConnections is a bioinformatics platform tailored to address the pressing needs of proteomic analyses. Organise identifications, evaluate the the acquired dataset and accelerate biological interpretation using bioinformatics applications.
speciateIT is a software package for speciation of 16S sequence data.
Smart servers that can provide customized snippets of digital orthophotos using just-in-time geoprocessing and interoperable web-based components. These servers are based on the MITOthoServers who was under the GNU Public License (GPL).1 weekly downloads
Assimilator is a molecular genetics tool to inform selection of associated genetic variants for functional studies
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Web based PHP interface to communicate to Maxima computer algebra system in the server. It takes user input, send it to Maxima, and show the output back to website. It could send almost any commands including 'plot2d' and 'plot3d' to plot graphs.
Maq is a set of programs that map and assemble fixed-length Solexa/SOLiD reads in a fast and accurate way.48 weekly downloads
Software for storing and analysing bacterial sequence data12 weekly downloads
Anubadok: The Bengali Machine Translator. A machine translation system for English to Bengali.
VCAKE is a genetic sequence assembler capable of assembling millions of small nucleotide reads even in the presence of sequencing error. This software is currently geared towards de novo assembly of Illumina's Solexa Sequencing data.
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Zonal Phylogeny Software (ZPS), given a protein-coding gene, searches for any footprints of recent/short-term positive selection, based on zonal phylogeny and related zone-based statistics.
Finance::Math::IRR, a Perl module to calculate the internal rate of return of a cash flow
If you manage phylogenetic data, Bio::NEXUS can make your life easier with a library and ready-made tools to manipulate and visualize NEXUS files (see http://www.molevol.org/nexplorer and http://search.cpan.org/dist/Bio-NEXUS/doc/Tutorial.pod).
DAWGPAWS is a suite of command line programs written in Perl that accelerates annotation of genes and transposable elements in plant genomes by automating the process of running annotation programs and facilitating combined evidence annotation curation.1 weekly downloads
Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.1 weekly downloads
This is an NIDS/HIDS, Network plus Host based Intrusion Detection System. Este é um NIDS / HIDS, Sistema de Detecção de Invasões Baseado em Redes e em Máquinas.
Part-of-speech tagging is the task of assigning symbols from a particular set to words in a natural language text. ACOPOST implements and extends well-known machine learning techniques and provides a uniform environment for testing.1 weekly downloads