Scientific/Engineering Software


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Scientific/Engineering Software

  • Focus on your Business with an integrated Business Cloud Focus on your Business with an integrated Business Cloud Icon
    Focus on your Business with an integrated Business Cloud Icon

    Reliable & Secure Communications Systems

    • 90+ features: video, file management, cloud phones
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  • Any Platform Anywhere: The Best Workflow Software Any Platform Anywhere: The Best Workflow Software Icon
    Any Platform Anywhere: The Best Workflow Software Icon

    Empower employees to improve their productivity with nocode process automation tools.

    Most people intuitively understand how workflows can streamline and speed up their business processes, integrate systems and route content to the right people. While every business has different needs, requirements and goals, workflow automation can help everyone. Whether you’re a company of 500 or 5,000, based in the cloud or on-premises, workflow automation can help maximize the efficiency of your business processes.
  • RDF Software Introspector

    The Introspector enables the programming tools that deal with source code such as the compiler to communicate in a standard and neutral manner reducing the accidental cost of programming.

    Downloads: 238 This Week Last Update: See Project
  • StarkOX Icon


    Open Source Robot Operating System

    StarkOX, the first universal Open Source AI Robot Operating System. It provides easy to use hardware abstraction and commonly-used functionality. Furthermore, strong cognitive functions, voice and pattern detection together with a new powerful scripting language provide possibilities to create and share abstract behavior patterns.

    Downloads: 208 This Week Last Update: See Project
  • IRST LM Toolkit

    A toolkit for language modeling.

    IRSTLM is no more supported on SourceForge. Please visit the new IRSTLM official website: IRSTLM: A tool for the estimation, representation, and computation of statistical language models. IRSTLM, the IRST Language Modeling Toolkit, features algorithms and data structures suitable to estimate, store, and access very large n-gram language models. Our software has been integrated into a popular open source Statistical Machine Translation decoder called Moses, and is compatible with language models created with other tools, such as the SRILM Tooolkit.

  • NCO netCDF Operators

    Command-line operators for netCDF and HDF files

    The netCDF Operators, or NCO, are a suite of file operators which facilitate manipulation and analysis of self-describing data stored in the (freely available) netCDF and HDF formats. Volunteers welcome! See homepage for details and download links.

  • PRINSEQ Icon


    A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.

    Downloads: 169 This Week Last Update: See Project
  • The First VoIP Communications Cloud in the World The First VoIP Communications Cloud in the World Icon
    The First VoIP Communications Cloud in the World Icon

    The Smarter Business Phone Solution

    • Powerful Unified Communication Features
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  • AquaTerm (Mac OS X graphics terminal)

    AquaTerm is a Mac OS X grahics renderer. It allows command line applications written in ObjC, C, FORTRAN, Lisp, Perl or Python to display vector graphics, text and images using a simple API. Adapters for gnuplot, PGPLOT, and PLplot exists as well.

  • Perl Data Language Icon

    Perl Data Language

    The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.


    Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)

  • Linux GPIB Support

    Linux GPIB Driver package (source)

    The Linux GPIB Package is a support package for GPIB (IEEE 488.2) hardware. The package contains a development environment consisting of a GPIB library written in C, kernel driver modules, and bindings for several other languages.

  • Gene Ontology

    The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.

  • Communicate & Connect with Ring Central's VoIP Solution Communicate & Connect with Ring Central's VoIP Solution Icon
    Communicate & Connect with Ring Central's VoIP Solution Icon

    Cloud Powered Business Phone System

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  • openEAR

    openEAR is the Munich Open-Source Emotion and Affect Recognition Toolkit developed at the Technische Universität München (TUM). It provides efficient (audio) feature extraction algorithms implemented in C++, classfiers, and pre-trained models on well-known emotion databases. It is now maintained and supported by audEERING. Updates will follow soon.

  • XASTIR Icon


    Multiplatform Ham Radio APRS and Mapping Program

    NOTE: Code commits are FROZEN on SourceForge: New code is now at <>. Real-time tracking & messaging of stations via radio/internet APRS data streams, w/125 map formats supported. Linux/FreeBSD/Solaris/MacOSX/Windows in any of 7 languages. Can also be used for mobile mapping w/GPS. MAILING LISTS ARE AT: PROJECT->WEB SITE.

  • miRDeep-P Icon


    miRDeep-P,miRDP for short, is a computational tool for analyzing the microRNA (miRNA) transcriptome in plants.

  • MicroGP Icon


    A multi-purpose extensible self-adaptive evolutionary algorithm

    MicroGP (uGP) is a versatile optimizer able to outperform both human experts and conventional heuristics in finding the optimal solution of hard problems. It is an evolutionary algorithm since it mimics some principles of the Neo-Darwinian paradigm.

  • proTRAC Icon


    Use proTRAC to annotate genomic piRNA clusters

    proTRAC detects genomic piRNA clusters. It considers all the relevant features of mapped sequence reads like the amount of 1U/10A, size and strand bias to ensure a high specificity.

  • Trinity RNA-Seq Assembly

    The Trinity RNA-Seq Assembly project provides software solutions targeted to the reconstruction of full-length transcripts and alternatively spliced isoforms from Illumina RNA-Seq data.

    Downloads: 78 This Week Last Update: See Project
  • scalpel

    Genetic variants discovery tool

    Bioinformatics pipeline for discovery of genetic variants from NGS reads.

  • SWISS::Knife

    Perl module for reading and writing UniProtKB data in plain text format.

  • HaploPainter

    HaploPainter - a pedigree and haplotypes drawing tool written in Perl/Tk. The software processes pedigree information in standard linkage formats combining haplotype information outputs from Simwalk, Genehunter, Allegro and Merlin.

  • Evoker

    Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.

  • Grinder Icon


    Grinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries for all main sequencing platforms.

  • Whole-Genome Shotgun Assembler

    Celera Assembler (CA) is a whole-genome shotgun (WGS) assembler for the reconstruction of genomic DNA sequence from WGS sequencing data.

  • softwares for phylogenetic trees

    TreeSoft is a collection of softwares that build or manipulate phylogenetic trees.

    Downloads: 50 This Week Last Update: See Project
  • DeconSeq Icon


    The DeconSeq tool can be used to automatically detect and efficiently remove sequence contamination from genomic and metagenomic datasets. It is easily configurable and provides a user-friendly interface. More at

  • metaf2xml Icon


    Parse and decode METAR, TAF, SYNOP, BUOY, AMDAR and write data as XML

    metaf2xml can download, parse and decode aviation routine weather reports (METAR, SPECI, SAO), aerodrome forecasts (TAF), synoptic observations (SYNOP), observations from buoys (BUOY) and meteorological reports from aircrafts (AMDAR). Data can also be taken from decoded BUFR messages. The extracted data can be written as XML or passed to a user-defined function (all done in Perl). It also provides XSLT style sheets to convert the XML to plain language (text, HTML), or XML with different schemas. A web-based (CGI) user interface can be used to download and display up-to-date weather data from NOAA, Ogimet, and other sources.

    Downloads: 17 This Week Last Update: See Project

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