CuiTools (Coo-e Tools) is a freely available package of Perl programs for unsupervised and supervised word sense disambiguation experiments. The name CuiTools comes from the Concept Unique Identifiers (CUIs) found in the Unified Medical Language System.
Current Comparative Table is a bioinformatics tool for running searches (like BLAST) with large sets of genes. It creates a table that allows you to view many results in many databases and downloads databases daily to ensure the most up-to-date results.
The Cybertory™ Virtual Molecular Biology Laboratory is an on-line virtual environment for conducting simulated experiments in molecular genetics.
D.U.C.K (Determine segmentation of Unknown words by using Context Knowledge)is an NLP tool, which aims to find the correct segmentation for unknown words in written Hebrew. Statistics from different scopes will be used to determine the segmentation.
DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).
DAWGPAWS is a suite of command line programs written in Perl that accelerates annotation of genes and transposable elements in plant genomes by automating the process of running annotation programs and facilitating combined evidence annotation curation.
DD Thought Tickler is a thinking process recorder. It is a kind of vector graphics editor and idea processor. It has new function not ever known. It records your thinking process, by memorizing every steps that you've operated on this tool.
FAST library for storing and displaying various types of statistics. Rock stable and robust and well-designed image output.
A probabilistic method for enzyme prediction that accounts for the sequence diversity across enzyme families.
DICOM.pm is a Perl library allowing interpretation of DICOM-compliant medical image files. It can be used by applications to transfer, interpret, and archive DICOM files.
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
this is atool that accepts a long DNA sequence and Produces DNA music according to Nucleotide base pair pattern. Helpful for Pattern analysis in Genomic Seqences.
Perl based unix agent which analyzes the health of a DNS service.
We want to create a linguistic tool (DTAG) for dependency treebanks and implement algorithms for serial dependency parsing with repair and machine translation, based on probabilistic lexicons learned from mo
PHP tool to display graphs and stats based on temperature readings stored in MySQL from 1-wire or any source of data. Also supports alarms, mobile access, and logging data from digitemp. Works in any browser.
DTW is intended to be a Voice in -> Pictures + Text out program written in java using Sphinx from CMU. This is intended to be useful to people who have good oral/visual literacy skills but poor written literacy skills.
Durito: a free (as in speech) application that will manage, display and analyse various kinds of documents in a diversity of environments. Central to Durito's operation will be technologies such as XML and RDF, both cornerstones of the W3C's Semantic Web.
Dasty is a web client for visualizing protein sequence feature information using DAS, the Distributed Annotation System.
The DeconSeq tool can be used to automatically detect and efficiently remove sequence contamination from genomic and metagenomic datasets. It is easily configurable and provides a user-friendly interface. More at http://deconseq.sourceforge.net
detect genomic deletions using NGS data
Bioinformatics software for analyzing the location of DNA motifs that induce self-catalytic depurination.
A Perl script that interfaces with the Devantech USB to I2C interface adapter. This script allows a user to read and write as a master to the i2c bus as well as set or get the value of the io pins.
A framework for interaction with networking devices from various vendors, over various transport mechanisms, and with various authentication schemes.
A nautical GIS navigation software written in Perl/Tk running on Windows, Linux and Macintosh platforms. It allows to calibrate maps,trace paths and show and record GPS and other NMEA informations.
Testcalc is a CGI-based calculator for diagnostic test characteristics written in Perl that displays results both numerically and graphically.