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The ADQ project aims to provide device drivers and a terminal based data acquisition and control program for the Meilhaus ME26 data acquisition board and the Meilhaus ME53 relay boards. The data can also be displayed in real time with a Web page.
A framework of drivers on which generic astronomical applications can be built.
ALEXA-Seq is a method for using massively parallel paired-end transcriptome sequencing for 'alternative expression analysis'.
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APEX Tools is a collection of utilities used in conjunction with the processing of airborne hyperspectral data developed for the ESA-Prodex supported Airborne Prism EXperiment (APEX).
APoDIx is a Portable Bio-Database Index system. It retrieves biological database information from the website of Oxford Journals, save them in a local position, and provides a viewer for display and search the information.
Virtual Image containing the ARMNLIB development environment and the GEM model from the Meteorological Research Division of the Canadian Meteorological Centre.
Alternative splicing event analysis tool
Metabolic reconstruction from DNA or protein sequences.
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ASKGene (Automated Sequence Knowledge GENErator) - a customizeable integration platform for sequence-processing bioinformatics tools.
Assimilator is a molecular genetics tool to inform selection of associated genetic variants for functional studies
ASpipe is a pipeline to process GeneSeqer/GMAP alignments and identify alternative splicing (AS) events from the alignments. It requires unix bash, perl 5.0+ with DBI module and MySQL5.0+ to run properly.
Novel Solexa (Illumina 1G) Base-Caller.
Abra stands for 'A brain extension'. The core idea is to create personal mappings onto information space and share those mappings. Ajax-enabled bookmarklet allows users to 'say anything about any URI', outputs RDFa. Has simple category-enabled CMS.
ELV provide a wide range of semi professional weather stations with USB connection capability. (WS500, WS550, WS300PC, ...) This projects provides a linux daemon to connect to the base station and obtain and store current and historic weather data.
Genetic analysis programs for affected sibling pair data and discrete traits, including multipoint exclusion mapping, map distance estimation, transmission disequilibrium testing, and relationship validation
An AI irc bot that will interact with irc users.
Albion is a digital document archive presentation package. Features include a searchable database, an integrated spell checker, and automatic thumbnail generation. As native Perl as possible, the database/photos/search-function can be delivered on CD!
Symbolic Algebra using Perl
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Algorithm::Evolutionary provides classes for performing simple evolutionary computation tasks, including definition of objects from XML and SOAP support. It should be interoperable with other EC libraries using SOAP.
Algorithm::MatchingModel is a perl library for running match simulations and statistics for two-sided matching problems. It includes classes for a preference factory, algorithm plug-ins, and gathering statistics between rounds.
A pipeline to define allele-specific genomic features
The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
Aquaria collects the source code needed to run the generation of the hssp / pssh databases and the visualisation of the content.
Based on the Buckwalter Morphological Analyzer (Version 1.0) for doing Arabic stemming and POS tagging. Includes a rewrite of the original Perl script, with better documentation and more flexible options, and a C++ interface (usable as a library or app).
A web UI to Arexx temperature loggers