Open Source Java Scientific/Engineering Software for BSD - Page 7

jBPM is a business process management system. The light-weight, embeddable engine can execute native BPMN2. jBPM offers eclipse-based and web-based tooling for developers and business users to create, monitor and manage your processes.

Entrainer is a Java program (JRE 1.8.0_40+ required, available from http://java.sun.com/javase/downloads/index.jsp) which creates binaural beat frequencies with sound, light and animations for the purpose of entraining one's brain waves.

NoteLab is an advanced "digital notebook" specifically designed for tablet computers. With its stroke smoothing, antialiasing, and "smart rendering," NoteLab provides a beautiful and powerful note taking environment on any operating system.

Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.

VStar is a multi-platform, easy-to-use variable star observation visualisation and analysis tool. Data can be read from a file or the AAVSO database, light curves and phase plots created, period analysis performed, and filters applied. Plugins can be developed, e.g. to make additional observation sources available. See also: 1. http://www.aavso.org/vstar-overview 2. http://www.aavso.org/forums/about-aavso/vstar 3. http://dbenn.wordpress.com/category/astronomy-science/vstar 4. http://www.citizensky.org/teams/vstar-software-development

The Logic Calculator is an application useful to perform logical operations. It has three modes: (1) Evaluation of logic formulae: In this mode we have the basic boolean operations (negation, conjunction, disjunction, conditional and biconditional) so the user can insert the logic formula and the Logic Calculator displays the truth table along with the models of the formula. (2) Logical entailment: In this mode the user can insert a number of premises followed by a number of conclusions, so the Logic Calculator displays the truth table of each premise / conclusion and the result of whether or not these premises logically entail the given conclusions. (3) Conversion of a formula to Disjunctive Normal Form (DNF) and Conjunctive Normal Form (CNF): In this mode the user inserts a logic formula and the Logic Calculator outputs its representation in both a DNF and CNF.

GATA is a graphic alignment tool for comparative sequence analysis. It makes use of BLAST to graphically align two DNA sequences, creating box- line- box representations of window scored local alignments. GATA also displays extensive GFF gene annotation.

MCS is a tool that exploits the Monte Carlo method and, with a complex algorithm based on the PERT (Program Evaluation and Review Technique), it estimates a project's time. MCS is a opensource project and it was devolped by Java Programming Language.

This project provides and open source implementation of HELD and related specifications. A HELD client and Location Information Server are included.

openModeller is a complete C++ framework for species potential distribution modelling. The project also includes a graphical user interface, a web service interface and an API for Python.

Eclim is a set of eclipse and vim plugins to integrate the two projects.

GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.

The GPS Simulator simulates a GPS receiver which emits NMEA sentences over Bluetooth. It can be used to test location based applications on real mobile devices, in particular on mobile devices which have a JSR 179 implementation based on a connected GPS.

An open tool, tied to www.hobbybirra.com, to formulate, manage, preview homebrewing recipes, upload them to a common repository, and share them with other homebrewers. Latest official releases on http://www.hobbybirra.it/hobbybrew/

Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring.

JConvert is a free unit conversion program that has a friendly user interface and can also be used with external applications. Conversions can be modified and/or added easily. Supports multiple languages. Downloads and runs in seconds! Try it now.

LAMINA (Leaf shApe deterMINAtion) is a tool to provide classical measures of leaf shape (blade dimensions) and size (area) as well as measures that indicate asymmetry in leaf shape and measures of herbivory damage (missing leaf area).

Symja - computer algebra language and Java symbolic math library. Moved to https://github.com/axkr/symja_android_library. The Android App can be found at: https://github.com/axkr/symja-example

BABA stands for Basic-Algorithms-of-Bioinformatics Applet. This project aims to create a set of bioinformatic algorithms presented didactically. The algorithms available at the moment are: Needleman&Wunsch, Smith&Waterman, Four Russians and Nussinov.

An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).

A small Java program for reading, analysing, viewing and animating the data from an EEG machine during a psychology experiment.

JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.

Petri-LLD is a graphical development environment for real-time automation control and is written in Java. It is based on a form of Petri net, and compiles to a number of programmable logic controller (PLC) languages as well as Java and Visual Basic.

Assists users to analyse and select players in Australian Football League (AFL) based football fantasy competitions. Displayed in a Java Swing GUI, users can sort and filter players based on many statistical categories.

JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de