EMTG is NASA Goddard's autonomous space mission design tool.
Warning, EMTGv8 is no longer supported by NASA GSFC. Furthermore, we are no longer able to supply a binary version. However, if anyone wants to use the source code for EMTGv8 and compile it yourself against a recent available SNOPT, we wish you the best. This will require some C++ programming skills and the ability to work with a complex build system. Some day in the future we hope to release EMTGv9 open-source, but for a variety of reasons it is not possible to do that right now.
The MCAPL Project provides a tool for prototyping BDI agent programming languages and model checking programs written in these languages via an interface to the JavaPathfinder model checker.
A Python package for CGNS
pyCGNS is now on github: https://pycgns.github.io/index.html https://github.com/pyCGNS/pyCGNS
External plugins for modnlp/teccli
This is a general project for modnlp/teccli plugins, with focus on text visualizaton.
Bow and arrow physics simulation
This project has moved to http://sourceforge.net/p/bow-simulator
An algebra editor
A text editor for maths. Simple algebra should be faster and more intuitive to perform on a computer than on paper and should look like maths. Write small fragments in plain text; perform simple click-and-drag algebra with the mouse; and explore more involved algebra through keyboard shortcuts. When done, save as plain text files or export to LaTeX and HTML.
A Java library for evolutionary biology and bioinformatics, including objects representing biomolecular sequences, multiple sequence alignments and phylogenetic trees.
In addition to RPKM (Reads Per Kbp per Million reads) values, RACKJ computes read counts for exons and splicing events. In so doing, it is feasible to compare two samples and identify genes with most significant difference in exon(splicing)-level.
CueMol - Molecular Visualization Framework
Patient monitor showing actual and simulated data
In intensive care units (ICU) patients vital signs are monitored. This is an attempt to build an interface which can show external and simulated medical data, to mimic these patient monitors. The motivation for this project are my experiments with building medical devices.
A small program for quickly generation of g-code. It can generate circular pockets, square pockets, etc. Now it can generate program from DXF. You can support a development with donation on my paypal page www.paypal.me/alexdevisa Небольшая программа для генерации G-кода. Может генерировать различные карманы, а так же поддерживает генерацию G-кода из файла DXF. Поддержать проект можно пожертвованием любой суммы на моей странице paypal - www.paypal.me/alexdevisa
PAN And Core-gEnome Analysis
A tool to calculate the Pan-Genome of a set of annotated genomes
A program for associating taxonomic information in a phylogenetic tree
TaxOnTree is a phylogenetic program for associating Taxonomic information in a phylogenetic tree. The output is a NEX format tree file configured to be opened in FigTree, that users can promptly color by any taxa or by the ancestrality shared by sequences with query. Input can be a Fasta formatted file to be used in a BLAST search or a list of sequences represented by their identifiers (UniProtAC or NCBI gi), if a cluster is already available. Also, a newick file produced with user software and specific settings can be used to proceed with the taxonomic labeling. TaxOnTree turns its user into an expert on taxonomy. TaxOnTree also corrects for the absence of some taxa in NCBI taxonomy. Command line program is easy to set up and can be coupled to several bioinformatics tools, producing a colored tree in PDF format. TaxOnTree is available as a web tool in http://biodados.icb.ufmg.br/taxontree for low demanding jobs.
Prolog+CG is a Java implementation of Prolog with extensions implementing a subset of the Conceptual Graph (CG) theory of John Sowa. CGs are first-class datatypes on a par with terms. Object oriented extensions are also included.
FCSalyzer is a free program for analysing flow cytometry data
FCSalyzer is a free program for analysing flow cytometry data. It is programmed in Java and should therefore work on many different operating systems. FCSalyzer offers an easy What-you-see-is-what-you get interface and provides the standard analysing tools - dot plots, histograms, complex gating strategies and associated statistics. Impressum / Legal Notice Sven Mostböck Murlingengasse 25/5 1120 Wien Austria e-mail: firstname.lastname@example.org second contact option: use the open discussion on the FCSalyzer sourceforge page: http://sourceforge.net/p/fcsalyzer/discussion/
A collection of utilities for atom probe tomography analysis
A collection of command-line tools for atom probe analysis including: * Point data XML scripting language, load, transform, resize and otherwise alter point data * Radial Distribution Function analysis tools * Level-set tools for simulating shape transformations during experiments
Packing two dimensional rectangular elements at orthogonal table
Program was created for optimized packing of two dimensional rectangular elements at orthogonal table with main purpose of printing cutting sheets that can be used for cutting material at production in wood and panel furniture manufacturing. It is developed upon authors several years of expirience at woodworking, and actual carpenters needs when such software is in question. Inspite its look it is fully functional peace of software , with all necessary elements needed for generating cutting sheets. GUI is simple and it consists of fields for entering table and element dimensions on the right, packing, optimization, cutting and cleaning table edges options section bottom left and statistic section bottom right. Upper left are table description field and cut sheet drawing at the center. Right click at the cut sheet drawing and there are printing options. NOTICE : This program was not created for sellers of chipboards and other board materials. All the best, Author
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). The framework allows one to build stand-alone medical imaging applications quickly and easily.
Make a TOC and links to original articles.
This program aims to make a TOC and links to original articles from middle sized text sets.
C++ Fuzzy Logic Programming Library - For problem solving in the fuzzy logic domain. It has an object oriented API well suited to C++ syntax for direct inclusion in source code. Portable to platforms that support the C++ STL.
This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA.
Analysis of Raman spectra and spectroscopy data.
Raman Tool Set has been developed as a user-friendly free software for processing and analysis of Raman spectra and spectroscopy data. RamanToolSet offers the following functions for processing: - scaling spectra - offset spectra - cut spectra - averaging spectra - smoothing spectra - normalizing spectra - background subtraction - polynomial subtraction The following analytical tools have been implemented: - Principal Component Analysis (PCA) - Clustering analysis - Extended Multiplicative Signal Correction (EMSC) analysis The following mapping tools have been implemented: - Producing single spectra files from Renishaw, Witec and Horiba mapping files (.txt) - Mapping the single spectra so imported from Renishaw, Witec or Horiba files - PCA is performed over mapping spectra and PCA-Scores are mapped - ICA is performed over mapping spectra and ICA-coefficients are mapped - Clustering analysis is performed over mapping spectra and Clusters are mapped
Corpus Linguistics Software
Some software for Corpus Linguistics, which includes Corpus Text Editor, Web-based search, etc. This project created for Belarusian Corpus, but can be used for other languages with some adaption.
A program for converting between physical units, such as feet and meters. There is a Java library, for use in Java applications, and a PalmOS application. It is able to mix units and convert between systems, such as the Metric and the English systems
PhysikGenie does, what a PhysikGenie is supposed to do. Doing Physics...