A fast and sensitive adapter trimmer for illumina paired-end sequences
This program implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.
Software for electromagnetic simulation
MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them.
MESA: Modules for Experiments in Stellar Astrophysics -- a set of thread-safe fortran 95 libraries for stellar astrophysics, including physics (e.g., eos, opacities, nuclear nets) and algorithms (e.g., ODE solvers). Available by svn checkout or as zip file. See project webpage (http://mesa.sourceforge.net/).
ADMS is a code generator that converts electrical compact device models specified in high-level description language into ready-to-compile c code for the API of spice simulators. Repository migrated to: https://github.com/Qucs/ADMS For checkout do: git clone https://github.com/Qucs/ADMS.git
Astrology software inspired by the SYMBOLON deck. This software calculates the planet positions and make symbolon card tables according to the calculated constellation. It can draw the classical circular horoscope also.
OCaml interface to FFTW3 -- the Fastest Fourier Transform in the West! (http://www.fftw.org/). The code is developed at https://github.com/Chris00/fftw-ocaml
An open tool, tied to www.hobbybirra.com, to formulate, manage, preview homebrewing recipes, upload them to a common repository, and share them with other homebrewers. Latest official releases on http://www.hobbybirra.it/hobbybrew/
PLC-Logger and Analyzer
Use PLC-logger to store and analyze data from almost every PLC-system. The following PLC-Systems are accessible: - Every PLC-System running a Modbus-TCP / Modbus-UDP Server - Siemens S7 via IBH NetLink - Siemens S7 with Ethernet-Interface - Codesys-based PLC-Systems - via OPC-Servers V0.61: - Bugfixes V0.60: - Some Bugfixes - Some data evaluation V0.59: - Modbus TCP Server Simulator supports Modbus UDP - Possibility to set bookmarks V0.57: - Modbus UDP supported - Edit configuration from connection-manager - Configuration keeps selected after starting or stopping V0.56 HF1: - Bugfix executing EasyModbusTCP Server Simulator V0.56: - Integration of EasyModbusTCP Server Simulator in "Tools"-Menue - Improvements in Modbus-Connection Wizard - Modbus Addresses shifted by (-1) to meet Modbus specification
Open Source from the Robotics Lab research group @ UC3M
Welcome to the open branch of the Robotics Lab research group @ Universidad Carlos III de Madrid (UC3M). We currently host 3 main projects here: * ASIBOT open source software, which includes basic simulation, control and vision: http://roboticslab.sourceforge.net/asibot * Datasets we use for machine learning: https://sourceforge.net/projects/roboticslab/files/Datasets * Nicolas Burrus' RGBDemo stuff.
BoofCV is an open source Java library for real-time computer vision.
BoofCV is an open source Java library for real-time computer vision and robotics applications. Written from scratch for ease of use and high performance, it provides both basic and advanced features needed for creating a computer vision system. Functionality include optimized low level image processing routines (e.g. convolution, interpolation, gradient) to high level functionality such as image stabilization. Released under an Apache 2.0 license for both academic and commercial use.
A cross platform GUI for OBD-II interface device control. Currently supporting ELM327 devices, the app allows you to view and clear error codes, and view live data from the ECU. Packages available for Windows and Linux (deb or rpm)
This project is not currently being maintained. If you want to take over, please contact the maintainer! CompPad is an OpenOffice.org extension that provides live mathematical and engineering calculations within a Writer document. It is intended to provide a free / open-source alternative to Mathcad .
A plugin for the quantitative analysis of Immunohistochemistry samples
Identification and scoring of cancer markers by Immunohistochemistry has been shown to be of value in determining the aggressiveness of specific cancers, as well as in predicting patient outcome for many cancer types. Despite its routine clinical use, a problem with the standard scoring method is the inherent subjectivity and variability of purely visual inspection. To diminish this visual perception biasing, IHC profiler has been developed as a standard automated scoring tool. -x-x-x-x-x-x-x- Full Publication and Citation: Varghese F, Bukhari AB, Malhotra R, De A (2014) IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples. PLoS ONE 9(5): e96801. doi:10.1371/journal.pone.0096801 Link: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0096801 -x-x-x-x-x-x-x- Your feedback would be highly appreciated. Please rate so we can work on improving it further. Thank you!
Neuroph OCR - Handwriting Recognition is developed to recognize hand written letter and characters. It's engine derived's from the Java Neural Network Framework - Neuroph and as such it can be used as a standalone project or a Neuroph plug in.
Horary astrology is an ancient branch of horoscopic astrology by which an astrologer attempts to answer a question by constructing a horoscope for the time at which the question Answered by the astrologer. Smart software. AstroOpenSource@gmail.com.
Muhkuh is a powerful and flexible test tool for hardware designs. Plugins are used to access the device under test or the testing equipment. Testcases are written in Lua and can be easily extended by the plugins. Sources for tests and additional tools like the flasher are on GitHub: https://github.com/muhkuh-sys
Linux GPIB Driver package (source)
The Linux GPIB Package is a support package for GPIB (IEEE 488.2) hardware. The package contains a development environment consisting of a GPIB library written in C, kernel driver modules, and bindings for several other languages.
This Eclipse plugin help you to create, edit and verify your GLSL (OpenGL Shading Language) and NVidia CG vertex and pixel shaders directly inside the Eclipse IDE. Each shader can be edit in an editor with syntax color with error/warning markers.
A Simple 2D CAD/CAM application (currently Windows-only) Cuts simple shapes (pockets, mostly) and simplified gears. It has a geometry mode that allows geometry defined by lines and arcs. It also generates geometry from any OpenType-style font!
The purpose of this program is to teach a computer to classify plants via their leaves. You just need to input the image of a leaf(acquired from scanner or camera), then the computer can tell you what kind of plant it is.
Java Machine Learning Library is a library of machine learning algorithms and related datasets. Machine learning techniques include: clustering, classification, feature selection, regression, data pre-processing, ensemble learning, voting, ...
SBEVSL is a collaborative project between Dowling and RIT on the development of a Structural Biology Extensible Visualization Scripting Language, so that users can move freely among various molecular graphics tools, such as rasmol, pymol, raster3d, etc.
The Wikipedia Miner toolkit provides simplified access to Wikipedia. This open encyclopedia represents a vast, constantly evolving multilingual database of concepts and semantic relations; a promising resource for nlp and related research.
PTools is a set of useful tools written in Pascal. It includes: scientific calculator, archiver, text editor, remote adminitration and more. It is designed to be portable across operating systems, specially Java-based mobiles, Windows and Unixes.
Free CMMS(computerized maintenance management system) is a web application for industrial maintenance departments to manage work orders, preventative maintenance, parts inventory, labor, and equipment.