Crystallographic software for displaying voxel maps - electron density
MCE is an crystallographic experimental program for 3D and 2D electron density map visualization. The software is mainly focused on visualization of ELD calculated from X-ray diffraction data of small molecules, but it will work for small proteins as well. Download the installation file (default download) or find in "Files" the zip-file with instant copy of the program which does not require the installation.
A MATLAB toolbox to simulate optical systems
Modal Interferometer Simulation Tool (MIST) is a MATLAB toolbox that can simulate arbitrary resonant optical systems in the paraxial beam approximation. It allows the user to define any optical setup (composed typically of laser sources, mirrors, lenses, electro-optical modulators and detectors) and to compute the static laser field at any point. It uses a Hermite-Gauss modal decomposition to simulate diffraction limited optics. This tool is being developed mainly for simulation of large scale interferometers with resonant cavities used for the detection of gravitational waves. Subscribe to the mailing list for updates and news. If you use MIST in your own simulation work, please cite is as G. Vajente, "Fast modal simulation of paraxial optical systems: the MIST open source toolbox" Classical and Quantum Gravity 30, 075014 (2013)
A highly flexible 3D flocking boids simulator, conceived as a tool for
This project concerns the design and implementation of an open-source flocking boids simulator, designed as a tool to analyze and characterize flock-like collective emerging behaviors. Each boid is conceived as an active agent and modelled by a point-mass approximation. Boid movements in a 3D space are guided by a set of elementary steering behaviors, each implemented as a force acting on the boid's point mass. Each boid is affected by interactions with both the environment and other boids. The set of considered behaviors are inspired by the well-known approach introduced in 1987 by C. W. Reynolds. The simulator delivers a 3D visual interface and provides as an output file all the instantaneous microscopic information related to each boid (positions and velocities over time), allowing in this way subsequent analysis, such as searching for synthetic and higher-level descriptions of collective behaviors, relying for instance on global network and meta-structural properties.
Scanning Probe Image Wizard - MATLAB Toolbox
SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific Instruments. A related open-source project SPIEPy (https://pypi.python.org/pypi/SPIEPy/) is developing a python library to for automated SPM imaged enhancement. SPIEPy brings many SPIW algorithms to the Python user.
Monte-Carlo simulation for ultra-cold neutrons
STARucn (Simulation of Transmission, Absorption and Reflection of ultracold neutrons) is a Monte-Carlo software designed to simulate experimental setups and guides for ultra cold neutrons. It relies heavily on CERN's ROOT packages. Developing team : Benoit Clément, LPSC/UJF Damien Roulier, ILL/UJF
Phase Sensitive Detection and Modulated Enhanced Diffraction Software
2DMED it is the second out of two programs which allows implementation of Phase Sensitive Detection (PSD) and/or Modulated Enhanced Diffraction (MED) techniques on the in situ data. This software takes normalized and averaged in situ data in flat file format (FLT) and performs PSD transformation which has been described in Urakawa, A.et al. Chem. Eng. Science 2008, 63, 4902. User can choose demodulation index k and perform several demodulation calculations. This is extremely important since demodulation calculations at k = 2 on in situ powder diffraction data represent implementation of MED method which been described in Chernyshov, D. et al. Acta Cryst. 2011, A67, 327. Demodulated data can be then viewed on 2D and/or 1D plot and analyses with different tools including In Phase Plot, Maximum Amplitude Plot and Positive Pattern Plot. Demodulated data also can be saved in ASCII format for further analysis.
This app interfaces a serial inclined plane and get its data
This app sets and gets the plane height and slope. You can see, store, load and plot plane test results to observe the rolling/sliding phenomen.
Analyse dynamical systems, plot its phase space and critical points.
Phase Space is born out of the need of a simple yet powerful open source tool to study dynamical systems. PhaseSpace allows you to plot the phase space of the dynamical system you are studying, its critical points and the curves of slope zero and infinite.It can also plot the solutions of the system and it's vector field. To use PhaseSpace you'll need to have Python installed along with Matplotlib and Numpy.
Simple software to convert many kinds of unity.
Unity Converter is the software, which have really good tools to convert many kinds of unity, it helps people whose works with physics too much, and also people who are engineer.
Physically correct simulation of 2D-waves
UPDATED VERSION ON GITHUB! http://github.com/AtiX/wavesim This is a physically correct simulation of waves on a surface, for example water-waves. It can also be used to simulate Microwaves, and has features like the support for different refraction indices, different wave sources and custom borders. Therefore, experiments like the double-slit-experiment can be easily simulated.
Goal: to make a lean, mean C++ engine capable of handling complex mathematical computations and to create a separate MFC (native C++) UI. NB: Project has been moved to Google Code: http://code.google.com/p/ultimath/
A simple N-Body simulator.
This project simulates the behavior, dynamics, and motion of a group of celestial objects. Given N point masses in a three-dimensional space, its present positions and velocities, and supposing that the force of attraction experienced between each pair of particles is Newtonian, the project approximately predicts it's positions and velocities at a future moment of time. The project can visualize the simulation, and create a graphic real-time output using FreeGLUT, and also have an option for textual output and archiving. Bugale N-Body Data Editor provides a graphic user interface for creating and editing the settings and body data files of Bugale N-Body Simulator. It can be found here: https://sourceforge.net/projects/bugaledataedit
Edit/create settings and data files(.bdf) of Bugale N-Body Simulator.
This project simply provides a convenient graphic user interface to create and edit the data files (simulation settings and body properties) for Bugale N-Body Simulator. You can find the Bugale N-Body Simulator project here: https://sourceforge.net/projects/bugalesimulator/ You must have Microsoft .NET Framework 2.0 (or later) installed on your system in order to use this editor: http://www.microsoft.com/download/en/details.aspx?id=21
Simple application to calculate cable electrical properties
With this ultra lightweight and very user friendly application you can calculate cable resistivity and it's power consumption just in seconds! NOTE: To calculate fraction numbers, make sure that you enter dot (.), not the comma (,) as a decimal symbol. If you are calculating amperage or cable area and in result you see comma, replace it by dot in further calculations. Else everything after comma will be ignored (number will be truncated).
Heat transfer in a bar and sphere using finite differences.
Simulation of the heat transfer in a bar and a sphere (1D) using finite differences in Matlab. Authors: -Jheyson A. Mogollon R. - email@example.com -Luca Meinardo - firstname.lastname@example.org -Angie Xiomara González - email@example.com Current Version: 2.0 Date: 30/05/2017
Tool for line edge parameters calculation
Load a folder with images from raster electron microscope, choose necessary options and let the algorythm calculate the characteristics of the line.
STM data analysis
A tool for visualisation and analysis of STM and STS results. Currently supports RHK, WinSPM, Nanonis and Createc file formats. Other formats can be added. Tools are made available by plugins and are currently focused on spectroscopy manipulation.
The Physics eXtension Library (PXL) is a C++ toolkit for fourvector analysis and hypothesis evolution in high energy physics data analysis.
Thermodynamic Properties in Python
This project site has been depreciated. The new PYroMat site can be found here: https://sourceforge.net/projects/pyromat/.
Home of the SansView project for SANS analysis
NOTICE: DEVELOPMENT OF THIS PROJECT HAS ENDED!! Its successor can be found at: https://sourceforge.net/projects/sasview ------------------ SansView is a Small Angle Scattering (SAS) analysis package for the analysis of 1D and 2D scattering data directly in inverse space. The focus was originally on neutron data (SANS) but has been used for X-ray’s as well and includes a tool for determining a slit resolution for the SAXSess instrument. SansView also includes PrView to invert SAS data to P(r), a resolution calculator, and a scattering length density calculator among others tools. A simple plugin mechanism is available for users to add custom models. This project was initiated by the NSF funded DANSE project, DMR-0520547, SANS sub-project at the University of Tennessee Knoxville. Acknowledgement of that original funding would be appreciated in any publications that make use of the software.
This is the work of Tim Hill (lead programmer) and Lashan Dias (lead artist).
A useless physics engine for useless game ;-)
Bow and arrow physics simulation for Windows and Linux
Bow Simulator is a free, open-source software tool for bow and arrow physics simulation. It allows you to create virtual bow models and simulate their static and dynamic performance. The results include things like deformation, draw curve, material stresses, arrow velocity, degree of efficiency and more. This way bow designs can be evaluated and optimized before actually building them. For more information visit http://bow-simulator.org
C++ implementation of Circuit extending its functionality
CircuitPlusPlus is a simulator for analog and digital circuits based on Falstad's Circuit. The intention of this implementation is to increase the performance, add new features and provide a solid switch-mode power supply simulation. See http://www.falstad.com/circuit/ for the original Circuit.
Simulator for dynamical systems
Simulator for dynamical systems Performs the simulation of systems built in interface, allowing the extraction of its transfer function as well as the graphs of its behavior. Initial Development: Maycon Gasoto Oriented by: Rogério Bastos Quirino Depends: wxWidgets mathomatic odeint