Science & Engineering Software

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Science & Engineering Software

  • Pyramid - The Complete Self-Service Analytics Platform Icon
    Pyramid - The Complete Self-Service Analytics Platform Icon

    Easily combine data from multiple sources to build dashboards and reports with our scalable solution built for mid-size to enterprise companies.

    Pyramid combines analytic tools often found in separate applications. It features a graphically based ETL to model data and incorporate machine learning algorithms, intuitive data discovery tools that produce simple and advanced visualizations, a presentation builder for creating analytic applications and presentations, and an enterprise-grade report builder—all in a single, integrated platform that can be accessed from any browser or device.
  • SolarWinds is #1 in Network Monitoring. Icon
    SolarWinds is #1 in Network Monitoring. Icon

    Reduce network outages and improve performance with advanced network monitoring software

    SolarWinds® Network Performance Monitor (NPM) is the ONLY monitoring solution with NetPath™ for hop-by-hop visibility into your critical paths, on-premises and into the cloud. NPM also features PerfStack™, helping you accelerate identification of root cause by dragging-and-dropping network performance metrics on a common timeline for immediate visual correlation across all of your network data. See why we're the leader. Try it free for 30 days!
  • Avogadro Icon

    Avogadro

    An intuitive molecular editor and visualization tool

    Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.

  • MUMmer

    MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.

  • AMOS

    AMOS is a collection of tools for genome assembly

    AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.

  • Perl Data Language Icon

    Perl Data Language

    The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.

  • Generic Model Organism Database Project Icon

    Generic Model Organism Database Project

    GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.

  • Find out what (or who) is slowing down your network Icon
    Find out what (or who) is slowing down your network Icon

    Get comprehensive network bandwidth analysis and performance monitoring with SolarWinds® Bandwidth Analyzer Pack.

    Network slow, but you don't know the cause? Use Bandwidth Analyzer Pack (BAP) to monitor and analyze network bandwidth performance and traffic patterns. With BAP, you can identify which users, applications, and protocols are consuming the most bandwidth. You can also monitor Wireless LAN Controller traffic to see what applications and clients are using your wireless network. Try it free for 30 days!
  • Gene Ontology

    The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.

  • Yet Another Prolog

    The Yap Prolog System is a ISO-compatible high-performance Prolog compiler. Yap is widely considered one of the fastest available Prolog systems. Yap supports coroutining, CLP(QR), CHR, and depth-bound search. Tabling and parallelism are in development.

  • PyWordNet

    A Python interface to the Wordnet database of word meanings and lexical relationships. allows the user to type expressions such as N['dog'], hyponyms(N['dog'][0]), and closure(ADJ['red'], SYNONYM) to query the database for lexical relationships.

  • DAGchainer

    DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).

  • One-Wire Weather Icon

    One-Wire Weather

    Oww (One-Wire Weather) is a server and client for Dallas Semiconductor / AAG 1-wire weather station kits.

  • DigitalOcean - The Total Cloud Computing Platform Icon
    DigitalOcean - The Total Cloud Computing Platform Icon

    Our platform was built with simplicity at the forefront, so developers can build and deploy with ease.

    DigitalOcean's predictable format removes infrastructure friction and allows developers more time to build software customers love. Easily deploy, manage, and scale applications of any size. DigitalOcean also provides the support you need with hundreds of in-depth tutorials and an active online community.
  • TransposonPSI

    TransposonPSI is an analysis tool to identify protein or nucleic acid sequence homology to proteins encoded by diverse families of transposable elements.

    Downloads: 8 This Week Last Update: See Project
  • Webtunnel

    Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.

  • Project Cogito

    Project Cogito is a artificial intelligence infrastructure to aid the development of thinking machines. It will provide the ability to create virtual worlds with loadable objects that brains can interact with. Administrative interfaces will be provided.

    Downloads: 4 This Week Last Update: See Project
  • ergatis

    Ergatis is a web-based utility used to create, run, and monitor reusable computational analysis pipelines, utilizing the Workflow engine. It contains pre-built components for common bioinformatics analysis tasks.

    Downloads: 4 This Week Last Update: See Project
  • SPM surfrend

    SPM surfrend toolbox is a suite of scripts that add surface-based rendering capabilities to SPM99/2 generated statistical maps.

    Downloads: 3 This Week Last Update: See Project
  • TIGR Spotfinder

    Spotfinder is an image processing software tool for microarray image analisys. It is written on C++ with QT GUI toolkit and runs on Windows, X11, and Mac OSX.

    Downloads: 3 This Week Last Update: See Project
  • Flow-Based Programming

    ** Deprecated ** Important! All of the software on this web site has been deprecated, and has not been maintained since 2014. All of this software is now being maintained on Github - and can be obtained from https://github.com/jpaulm . Changes and enhancements are still ongoing, and while older software should still work, newer features described in the literature will not be available in SourceForge. The old license was the Artistic license - the software is now in process of being converted to LGPL. This will gradually take place (on Github) over the next few months (in 2016). JavaFBP is now also on Maven.

  • EVidenceModeler (EVM)

    EVidenceModeler (aka EVM) combines ab initio gene predictions and spliced protein and transcript alignments into weighted consensus gene structure predictions.

    Downloads: 2 This Week Last Update: See Project
  • Ramugen : Random Music Generator

    Ramugen is a music application which assists in / automates composition along stochastic/indeterminate lines. Comes as a Win32 desktop application and a Borland Delphi component-package. Open Source : full source-code and documentation provided. Very fle

    Downloads: 2 This Week Last Update: See Project
  • Voltage Drop Calculator

    Voltage Drop Calculator for EE, supports multiple segments, 1 and 3 phase.

    Downloads: 2 This Week Last Update: See Project
  • Cocoa 3D Tutorial

    The project will provide a Cocoa framework to interface OpenGL in a more OO-fashioned style. It is not meant to be the fastest code possible, nor to leverage all the power of OpenGL, but to give developers a easy way to start working in 3D

  • GAMS Development Environment

    The intentions of this project are as follows: 1; Determine the potential interest level in developing a basic interface for creating models in GAMS (General Algebraic Modeling System). 2; To create a sounding board for what should be added to the exist

  • Interactive Room Software Infrastructure

    iROS is a meta-operating system for technology-rich "interactive rooms". The core components (Event Heap, DataHeap, iCrafter) provide communication, data storage, and service management for an iRoom.

  • UbikSolve

    sparse linear algebra library, with emphasis on preconditioned Krylov subspace methods for the solution of linear systems of equations

  • PerlMol

    PerlMol is a collection of Perl modules for chemoinformatics and computational chemistry with the philosophy that "simple things should be simple". It should be possible to write one-liners that use this toolkit to do meaningful "molecular munging".

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