Advanced image processing toolbox for Scilab on Unix/Linux/Mac OS
SIP is the image processing and computer vision package for SciLab, a free Matlab-like programming environment. SIP reads/writes images in formats like JPEG, PNG, and BMP. It does filtering, segmentation, edge detection, morphology, and shape analysis. Download from Git http://siptoolbox.sourceforge.net/devel
Earth orbits and coverage display in 3D on your laptop.
SaVi - simulate Iridium, Globalstar, O3b, Sirius Radio, GPS, Galileo and other satellite constellations, modify them, or design your own. Uses Tcl/Tk and Unix libraries; 3D viewing option requires Geomview running on X Window.
The new site is at http://psychometricon.net/libirt/
The new site is at http://psychometricon.net/libirt/ Library of functions to estimate the items and abilities from the responses of subjects to a questionnaire. The IRT models supported are the logistic model, the multivariate logistic model, the graded model and smoothing by penalization and kernel.
TFEL/MFront introduces DSLs based on C++ to handle material knowledge
The TFEL library is a collaborative effort of the French Atomic Commission and Électricité de France. TFEL mostly includes the MFront code generator. MFront is based on C++ and provides several domain specific languages which were designed to simplify the implementations of new material properties, mechanical behaviours and simple material models. A particular focus was made on mechanical behaviours which are by essence more complex and may have significant impact on the numerical performances of mechanical simulations. Various performance benchmarks show that the code generated using MFront is in most cases on par or better than other implementations, generally written in Fortran. For mechanical behaviours, MFront introduces interfaces for various finite element or FTT solvers (Cast3M, Code-Aster, ZeBuLoN, Abaqus, Europlexus, AMITEX_FFT, etc..). The authors hope that it will prove usefull for researchers and engineers, in particular in the field of solid mechanics.
Calc: arbitrary precision C-like arithmetic & calculator
Calc is arbitrary precision C-like arithmetic system that is a calculator, an algorithm prototyper and mathematical research tool. Calc comes with a rich set of builtin mathematical and programmatic functions.
Pattern-based multi/many-core parallel programming framework
FastFlow is a C/C++ programming framework supporting the development of pattern-based parallel programs on multi/many-core, GPUs and distributed platforms. FastFlow run-time is built upon non-blocking threads and lock-free queues. Thanks to its very efficient CAS-free communication/synchronization support (e.g. few clock cycles core-to-core latency), FastFlow effectively supports the exploitation of fine grain parallelism, e.g. parallel codes managing very high frequency streams on commodity multi-core. FastFlow works on x86, x86_64, PPC, ARM, and Linux, Mac and Win XP/7. From Jan 1, 2018 code development migrated on GitHub at https://github.com/fastflow/fastflow
This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
Parse and decode METAR, TAF, SYNOP, BUOY, AMDAR and write data as XML
metaf2xml can download, parse and decode aviation routine weather reports (METAR, SPECI, SAO), aerodrome forecasts (TAF), synoptic observations (SYNOP), observations from buoys (BUOY) and meteorological reports from aircrafts (AMDAR). Data can also be taken from decoded BUFR messages. The extracted data can be written as XML or passed to a user-defined function (all done in Perl). It also provides XSLT style sheets to convert the XML to plain language (text, HTML), or XML with different schemas. A web-based (CGI) user interface can be used to download and display up-to-date weather data from NOAA, Ogimet, and other sources.
Open Source CPAP Research and Review Software
Open-source, cross platform, sleep tracking software with a focus on monitoring CPAP treatment. Please see http://sleepyhead.jedimark.net for official release information and latest downloads.
clipsmm is a C++ interface to the CLIPS libray, a C library for developing expert systems.
The 3D Toolkit provides algorithms and methods to process 3D point clouds. In includes automatic precise registration (6D simultaneous localization and mapping, 6D SLAM) and other tools, e.g., a fast 3D viewer, plane extraction software, etc.
Profiling and analysis of laser beams with ImageJ
This open-source software enables profiling and analysis of laser beams. It can be used with a variety of cameras supported by ImageJ and Micro-Manager, or images from any other source. It provides all common analysis methods like D4Sigma, knife-edge, as well as fitting of Hermite-Gauss and super-Gauss functions.
CueMol - Molecular Visualization Framework
A library for multiple precision math - arbitrarily large numbers - in TCL. Based on the original mpexpr library from Tom Poindexter.
Object-oriented crystallographic library and program, for the analysis of Crystal structures from scattering experiments: optimized scattering computation, Graphical interface for structures and data, global optimization algorithms.
The Repast Suite is a family of free agent-based modeling libraries.
The Repast Suite is a family of advanced, free, and open source agent-based modeling and simulation libraries that have collectively been under continuous development for over 10 years.
The GNU Prolog native compiler
GNU Prolog is a free implementation (under GPL) of the logic programming language PROLOG. It can compile to native machine code which is extremely fast in execution. Another feature is the included constraint solver.
CAD 2D for Land Surveying and Civil
Operating System : Windows - Linux - Mac OS Drawing 2D Point Line Polygon Rectangle Circle Ellipse Text,Image with thickness,color,hatch... Drawing commands : rotation,scale,explode... Labeling Point Line Polygon Rectangle Circle (Name Code Comment XYZ Length Angle Area Radius ...) Area Calculation by points or by object. Import-Export module : Image bmp,jpg,png CSV TXT SVG DXF R12 SOKKIA SDR33 TOPCON FC4 GTS7 XML LANDXML LEICA GSI8 GSI16
wmweather+ will download the National Weather Serivce METAR bulletins; AVN, ETA, and MRF forecasts; and any weather map for display in a WindowMaker dockapp. Think wmweather with a smaller font, forecasts, a weather map, and a sky condition display.
Sail7 is a design and optimisation tool for sail performance.
Sail7 is an analysis tool based on the linear panel methods. It is a derivative of xflr5.
Open Source and data mining software
ADaMSoft is a free and Open Source Data Mining software developed in Java. It contains data management methods and it can create ready to use reports. It can read data from several sources and it can write the results in different formats.
GNU Gluco Control (GGC) is diabetes management application. It helps managing user's daily data, food data. Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5).
A shared memory parallel sparse matrix library including Sparse BLAS.
librsb is a library for sparse matrix computations featuring the Recursive Sparse Blocks (RSB) matrix format. This format allows cache efficient and multi-threaded (that is, shared memory parallel) operations on large sparse matrices. The most common operations necessary to iterative solvers are available, e.g.: matrix-vector multiplication, triangular solution, rows/columns scaling, diagonal extraction / setting, blocks extraction, norm computation, formats conversion. The RSB format is especially well suited for symmetric and transposed multiplication variants. On these variants, librsb has been found to be faster than Intel MKL's implementation for CSR. Most numerical kernels code is auto generated, and the supported numerical types can be chosen by the user at build time. librsb implements the Sparse BLAS standard, as specified in the BLAS Forum documents.
Lush is a Lisp dialect with extensions for object-oriented and array-oriented programming. Lush is intended for prototyping numerically intensive applications and is designed for easy integration of existing C/C++/Fortran codes.
Enhanced tool for detecting CNVs from whole-exome sequencing data
ATTENTION!!!!!ATTENTION!!!!!ATTENTION!!!!!ATTENTION!!!!! We recently published on BMC Genomics a novel software package, named XCAVATOR, for the identification of CNVs/CNAs from short and long reads whole-genome sequencing experiments (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-4137-0). XCAVATOR is freely available at http://sourceforge.net/projects/xcavator/. EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2 enhances the identification of all genomic CNVs, both overlapping and non-overlapping targeted exons by integrating the analysis of In-targets and Off- targets reads. EXCAVATOR2 can be effectively employed for the identification of CNVs in small as well as large-scale re-sequencing population and cancer studies. EXCAVATO2 paper: http://nar.oxfordjournals.org/content/early/2016/08/09/nar.gkw695.full?keytype=ref&ijkey=O8r64Qj81gfMzLo