PyMOL is an OpenGL based molecular visualization system
PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source PyMOL is free to everyone!
The Pure Data (short Pd) project on SourceForge unifies the extensions (or externals) written for the Pure Data Graphical Computer Music System written by Miller Puckette with contributions from many others.
a tool for segmenting, labeling and transcribing speech
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.
EMU is a collection of software tools for the creation, manipulation and analysis of speech databases. At the core of EMU is a database search engine which allows queries based on the sequential and hierarchical structure of the annotations.
Security Officers Management and Analysis Project (SOMAP) is all about defining security management work methods and supplying Security Officers with tools to do their job more efficient and following standards easily.
IBISA stands for "Image-Based Identification/Search for Archaeology". It is free software aiming to manage collections of photos of archaeological objects and find similarities between these objects by means of a simple graphical user interface.
tkBacktracer is a cross-platform interactive visualization tool to explore the tool motions in RS-274D "G-code" CNC files used in computer controlled milling and manufacturing.
AGTK is a suite of software components for building tools for annotating linguistic signals, time-series data which documents any kind of linguistic behavior (e.g. audio, video). The internal data structures are based on annotation graphs.
Open Source and Portable object oriented software for 3D digital image segmentation and visualization. Pipes and Filters Architechture. Implemented in C++, and uses FLTK, VTK, ITK, TCL (plugins), and pipeline filters implemented in XML. DICOM support.
A library for multiple precision math - arbitrarily large numbers - in TCL. Based on the original mpexpr library from Tom Poindexter.
ProtoFit is software for modeling the acid/base behavior of surfaces. The software is used for parameterizing surface protonation models and for visualization of potentiometric titration data.
This project aims to develop open source psychometric data analysis software, including estimation software for Rasch and Item Response Theory (IRT) models for both dichotomous and polytomous test items.
The main scope of the program is to take Thermo-Calc or Dictra (both registered trademarks) and transform them into nicely formatted encapsulated postscript diagrams, generated by gnuplot. But exp2plt can also be used as a graphical interface to gnuplot.
GamesCrafters is an undergraduate research group at the University of California, Berkeley. GAMESMAN is our software for building text & X11 apps for finite, 2-person abstract perfect-information games (e.g., TicTacToe & chess). We've authored 40+ games
upf2cpf is a cool command line tool which will takes in a UPF(Unified Power Format) and will convert it to a CPF(Common Power Format).This tool is very useful for Chip Design Engineers, who want to feed the power related info about the RTL in UPF/CPF.
*** This page is no longer used by the Dasher project - please see http://www.inference.phy.cam.ac.uk/dasher/ *** Dasher is a data entry interface incorporating language modelling and driven by continuous two-dimensional gestures, e.g. a mouse, a stylus
GenomePixelizer is a program for comparative genomics, detection of duplication events in genomes, tracking the "footprints" of evolution. It may be considered as a drawing tool that generates custom images of genomes out of the given set of genes.
GroupKit is a Tcl/Tk library that makes it easy to prototype and build real-time collaborative applications (groupware), such as multi-user drawing tools, text editors, meeting tools, and much more.
Liam3 is a framework linking several external software to provide a MABS development environment for situated 3d agents and to display these agents in a real time 3d rendering engine. Initially it is linking MadKit and The Nebula Device.
Software from LoCI Laboratory is devoted to information logistics, the study of the flexible coscheduling of the physical resources that underpin computer systems: storage, computation, and data transmission. We use IBP, L-Bone, exNode and LoRS.
emXML is a standard for archiving and processing Eye Movement data; it also comes with a set of tools to convert, visualize, edit, and summarize Eye Movement data.
dna2abc turns DNA sequences into musical sequences. The key feature is the rule editor; a rule is a regular expression paired with a Tcl script. dna2abc scans a DNA sequence, testing each regular expression: if it matches, the Tcl script is run.
tkCybernetics is a small grafical tool for rapidly setting up simulations of simple cybernetic systems. It was designed for didactic purpose but might be useful for the quick test of some circuit too.
SigLab is a signal calculator for Scilab. Its goal is to ease the analysis of signal processing simulation results. It allows to view and to manipulate monodimensional signals in a interactive and easy way.