PERL Plot : Plotting program for DSP and Communications. Includes multi-column, scatter,bar,pole-zero,eye diagrams, log-log, polar , polar db and other plot types.
A software package (Perl script tools) for analyzing large quantities of Resequencing Array (RA) datasets of DNA sequence, enabling population genomic studies of microbial organisms.
unipred is short for Universal Predictor - software that would predict future and possibly past events based on the algorithm used in Bible Code, prediction philosophies used in Tarot cards and latest developments in astrology, quantum physics etc.
Under development for Prof Stephen Hawking and people like him. With control of a single click only, the solution user should Type, Speak, and Command the computer. We want to expand beyond English and MS Windows to multiple languages, multiple platforms
Differential expression analysis tool for miRNAs in temporal studies
The microRNA Temporal Analyzer (mirnaTA) is a bioinformatics tool which can be used to identify differentially expressed miRNAs in temporal studies. It is implemented in Perl and R package (>= 2.13.0) and can be run across multiple platforms such as Linux, Mac and Windows. The mirnaTA requires that users provide data from a minimum of two time points and analyze up to 20 time points. To normalize data and remove technical variability, Normal Quantile Transformation (NQT) was used, and the normalized data is analyzed using linear regression model to locate any miRNAs which are differentially expressed in a linear manner. Any miRNAs with P-value<0.05 are considered statistically significant. Remaining miRNAs which did not fit in linear model are further analyzed in two different methods: (1) if the number of time points <3, CDF of the normal distribution, and (2) if the number of time points is >= 3, ANOVA is utilized. http://www.gigasciencejournal.com/content/3/1/20