Open Source MATLAB Scientific/Engineering Software for Linux - Page 7

A MATLAB package for wavelet analysis of circadian rhythms with both discrete (Daubechies) and continuous (Morlet) wavelets, as well as tools for batch processing of multiple time series, all accessible through a graphical user interface.

mTRF-Toolbox is a MATLAB package for modelling multivariate stimulus-response data, suitable for neurophysiological data such as MEG, EEG, sEEG, ECoG and EMG. It can be used to model the functional relationship between neuronal populations and dynamic sensory inputs such as natural scenes and sounds, or build neural decoders for reconstructing stimulus features and developing real-time applications such as brain-computer interfaces (BCIs). Toolbox Paper: http://dx.doi.org/10.3389/fnhum.2016.00604 Methods Paper: https://doi.org/10.3389/fnins.2021.705621

Supports flow Simulation for Physics and Meso-Compartimental Simulations for Biological Systems. Uses a Container-Flow based System.

Implementation of the A2RMS Algorithm for univariate densities defined for real values.

ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization packages and for extending it with user-written optimization routines.

A framework for the Automatic Control systems investigations for Matlab/Octave. Includes Gurvitz, Raus, Nikvist, Mihailov stability kriteries.

APEX Tools is a collection of utilities used in conjunction with the processing of airborne hyperspectral data developed for the ESA-Prodex supported Airborne Prism EXperiment (APEX).

Advanced Quality Assurance for Aerometric-Data (AQUA) is an open-source quality assurance platform for wind resource data. Developed and currently maintained by the Wind Energy Center at the University of Massachusetts. See www.umass.edu/windenergy

Set of tools for algebraic derivative estimation, based on the work of Fliess and its collaborators.

Embedded system design (VHDL description) based on Xilinx's Spartan3E Development Kit to perform real-time PID control and monitoring of time critical plants such as brushless DC motors, maglevs... vimeo.com/channels/anie prezi.com/gpbycavq499c/anie/

Anmech is a tool for symbolic calculations and mathematical modelling using Matlab. Its main functions are automated derivation of equations of motion of mechanical systems and derivation of system of differential equations with numeric parameters.

Matlab, Maple and C/C++ applications of Linear Algebra in many domains, including curves in many dimensions, Cryptography and Chaos etc.

ArchNURBS is a MATLAB tool for the analysis of planar curved structures, with a particular attention to masonry arches. As in CAD softwares, the geometry of the model is defined by a NURBS representation of the structure. Indeed, the user can upload geometries imported from a CAD environment. Based on such a representation, ArchNURBS performs the elastic isogeometric finite element analysis and the collapse limit analysis of the structure. It is possible to include in the analysis the presence of Fiber-Reinforced Polymers (FRP) extrados and intrados strips. A comprehensive descritpion of ArchNURBS is given in "ArchNURBS: NURBS-Based Tool for the Structural Safety Assessment of Masonry Arches in MATLAB", A. Chiozzi, M. Malagu', A. Tralli and A.Cazzani, J. Comput. Civil Eng., 2015. (http://ascelibrary.org/doi/abs/10.1061/%28ASCE%29CP.1943-5487.0000481) ArchNURBS has been developed thanks to a collaboration between the University of Ferrara (Italy) and the University of Cagliar

Open Source code for machine learning applied to anthropological/art objects. initially a collaboration between C. Wiggins+I. Tamaru (Columbia) and A. Gansell (Harvard) to identify true regions for lost/misplaced objects recovered in mesopotamia (Iraq).

A collection of scripts and functions for the analysis of atom probe tomography data. Currently, this includes: standard file operations, plotting mass spectra, mass spectra analysis and mass peak overlap solving. For more information see the Wiki: https://sourceforge.net/p/atomprobelab/wiki/Home/ Quick overview video: https://youtu.be/8rJHce7M5UU More in-depth video using the APT school demos live script: https://www.youtube.com/watch?v=cyrLHCzZwuw For details of the maximum likelihood method used to solve peak overlaps see the following papers: https://doi.org/10.1017/S1431927616012782 and https://doi.org/10.1017/S1431927618016276 for the quantification of the uncertainty. If you are looking for Dan Haley's "weights" program, go here https://sourceforge.net/projects/apttools/files/extras/

Audio spectrum analyzer in software module and a hardware module to display the spectrum.

AutoSmooth is a compiled stand-alone graphical interface for signal and derivative extraction from time series with nonstationary noise structure. AutoSmooth is now part of the Signal Extraction Toolbox (SET).

BUHO is a MATLAB script for the identification of cells and high-contrast cellular objects according to their similarity to prototype objects

Software developed under MATLAB R14 environment. It's aim is to make the modeling of bacterial inactivation system and adjust a simulator to obtain new data of the experiment or validate the one that has been obtained at the laboratory.

The Banane project is a collection of MATLAB routines for processing, analysis and visualization of neurophysiological data, in particular multiple sequences of action potentials, as are commonly recorded with multielectrode arrays.

This project is aimed at analysis of the bat's cochlear model for its echo location performance. It uses DSP and statistical/stochastic signal processing theory. Language: Matlab and C/C++

Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/

A C++ library for the computation of bifurcation diagrams: it provides tools for the integration of systems of ODEs that depend on parameters. A Python interface is included.

This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis.

A Matlab Toolbox for uncertainty analysis of biochemical networks via semidefinite programming.