Open source Health IT for the planet
OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software.
ScadaBR is a SCADA (Supervisory Control and Data Acquisition) system with applications in Process Control and Automation, being developed and distributed using the open source model.
Data quality analysis, profiling, cleansing, duplicate detection +more
DataCleaner is a data quality analysis application and a solution platform for DQ solutions. It's core is a strong data profiling engine, which is extensible and thereby adds data cleansing, transformations, enrichment, deduplication, matching and merging. Website: http://datacleaner.github.io
Semantic annotation of archaeology reports with respect to CIDOC-CRM
The semantic annotation system OPTIMA is the result of Andreas Vlachidis PhD work, (supervised by Prof. Douglas Tudhope, University of Glamorgan, UK). OPTIMA performs the NLP tasks of Named Entity Recognition, Relation Extraction, Negation Detection and Word Sense Disambiguation using hand-crafted rules and SKOS terminological resources (English Heritage Thesauri and Glossaries). The resulted semantic annotations are associated with classes of the (ISO 21127:2006) CIDOC Conceptual Reference Model (CRM) and its archaeological extension, CRM-EH. OPTIMA is also targeted at the detection and recognition of contextual relations between CRM entities. Such relations are modeled with respect to the CRM-EH archaeology extension. The pipeline targets the CIDOC-CRM entities; E19.Physical_Object, E53.Place, E49.Time_Appellation and E57.Material and the CRM-EH entities; EHE1001.Context_Event, EHE1002.Production_Event, EHE1004.Deposition_Event and P45.consists_of material property
Wrapper for vendors to simplify usage of the Java Speech API (JSR 113). Note that the spec is an untested early access and that there may be changes in the API.
FCSalyzer is a free program for analysing flow cytometry data
FCSalyzer is a free program for analysing flow cytometry data. It is programmed in Java and should therefore work on many different operating systems. FCSalyzer offers an easy What-you-see-is-what-you get interface and provides the standard analysing tools - dot plots, histograms, complex gating strategies and associated statistics. Impressum / Legal Notice Sven Mostböck Murlingengasse 25/5 1120 Wien Austria e-mail: email@example.com second contact option: use the open discussion on the FCSalyzer sourceforge page: http://sourceforge.net/p/fcsalyzer/discussion/
An open tool, tied to www.hobbybirra.com, to formulate, manage, preview homebrewing recipes, upload them to a common repository, and share them with other homebrewers. Latest official releases on http://www.hobbybirra.it/hobbybrew/
A geometry library for Java
A java library for geometry applications. Provides a general framework for manipulating and creating geometric primitives, computing intersection points between shapes, composing them to create new shapes, and performing some measurements. Important note: the repository has now moved to GitHub: https://github.com/dlegland/javaGeom Please update bookmarks!
BoofCV is an open source Java library for real-time computer vision.
BoofCV is an open source Java library for real-time computer vision and robotics applications. Written from scratch for ease of use and high performance, it provides both basic and advanced features needed for creating a computer vision system. Functionality include optimized low level image processing routines (e.g. convolution, interpolation, gradient) to high level functionality such as image stabilization. Released under an Apache 2.0 license for both academic and commercial use.
Java Machine Learning Library is a library of machine learning algorithms and related datasets. Machine learning techniques include: clustering, classification, feature selection, regression, data pre-processing, ensemble learning, voting, ...
CNC code generator is a software to generate CNC codes (G & M codes) for maching operations like milling, drilling. At present CNC code generator is limited for end milling. we working on other machining operations like turning, drilling etc.
Java Behaviour Trees is a Java framework for easily building and running generic behaviour trees. Here, "behaviour tree" refers to the technique used to control the behaviour of characters in video games. IMPORTANT NOTE: our source code has been moved to GitHub. You will find it at: https://github.com/gaia-ucm/jbt Note however that all the binary files will still be distributed here at SourceForge.
Portable Ubuntu Linux for Scientific Computing
Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated. https://sourceforge.net/projects/portable-linux/files/ Installation 1. Download the Wubi installer http://releases.ubuntu.com/saucy/wubi.exe 2. Install any flavor of Ubuntu. 3. Swap out the root.disk with the ones provided here. Overview LAMP stack running on localhost (127.0.0.1). Scientific, productivity & media packages include R (Rattle Data Miner), GridEngine, Condor, cooperative computing tools, WINE, LibreOffice, Evolution, Clinica, Neuro Debian Desktop, PsycoPy, OpenVibe, 3DSlicer, Paraview, Openshot. Cheers, Gregory Remington
Dioscuri is an x86 computer hardware emulator written in Java. It is designed by the digital preservation community to make sure that documents and programs from the past can still be accessed in the future. Dioscuri is durable and component-based.
A web-based platform for collaborative research and high-performance computing interface, a tool for implementation of virtual labs.
An Android App Dealing with Smartphone Sensors
This is an Android App for 2.3.3 Android OS and above. It deals with Hard- and Software Sensors which are integrated in Nowadays Smartphones. The User can select the Sensors and observe the current values of - Accelerometer - Gyroscope - Magnetometer - GPS Position - .... and other Sensors A Stream containing the Sensor-Values in CSV- Format by WLAN To a Client and/or a Stream To a SD-Card can be started and stopped. The Sensor-Update frequency can be adjusted. There are some GPS-Algorithms running in the Background which transform the GPS data in different coordinate frames. The Stream via WLAN uses the User Datagram Protocol (UDP) Interface. In order to receive the data you can use something like the Java File "QuoteClient"in the Files-Section.
This project is not currently being maintained. If you want to take over, please contact the maintainer! CompPad is an OpenOffice.org extension that provides live mathematical and engineering calculations within a Writer document. It is intended to provide a free / open-source alternative to Mathcad .
niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/
This Eclipse plugin help you to create, edit and verify your GLSL (OpenGL Shading Language) and NVidia CG vertex and pixel shaders directly inside the Eclipse IDE. Each shader can be edit in an editor with syntax color with error/warning markers.
Neuroph OCR - Handwriting Recognition is developed to recognize hand written letter and characters. It's engine derived's from the Java Neural Network Framework - Neuroph and as such it can be used as a standalone project or a Neuroph plug in.
The Wikipedia Miner toolkit provides simplified access to Wikipedia. This open encyclopedia represents a vast, constantly evolving multilingual database of concepts and semantic relations; a promising resource for nlp and related research.
Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3).
TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3). The main goal is to perform a quick analyzis of the trace file produced by ns-3's simulations and calculate useful metrics for research and performance measurement. Such tool is needed because a research simulation may generate a trace file with thousands of lines, becoming dificult to analyze manually. Due to this, this tool can be handy in case someone needs a metric that the tool already support. TraceMetrics is an opensource tool, developed in Java and the code can be found here. We encourage the users to report any bugs found in the tool, mailing us at tracemetrics (at) tracemetrics.net
CorpusSearch finds syntactic structures in a corpus of annotated sentence trees. It can be used as a research tool on a corpus, or as a development tool for building the corpus.
Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/