Science & Engineering Software

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Science & Engineering Software

  • Identify and respond to threats before damage is done Identify and respond to threats before damage is done Icon
    Identify and respond to threats before damage is done Icon

    A SIEM that makes it easy to use logs for security, compliance, and troubleshooting.

    SolarWinds® Log & Event Manager (LEM) delivers comprehensive Security Information and Event Management (SIEM) capabilities in a highly affordable, easy-to-use, and quick-to-deploy virtual appliance. LEM provides the visibility, security, and control that IT professionals need to alert on and respond to security threats, and assist in meeting the regulatory compliance guidelines of HIPAA, PCI DSS, SOX, and more. Try it free for 30 days!
  • Trial SolarWinds Backup and you could receive a free Amazon Echo Dot Trial SolarWinds Backup and you could receive a free Amazon Echo Dot Icon
    SolarWinds Backup provides lightning-quick recovery that can restore business continuity after a disaster. For a limited time only, when you try SolarWinds Backup and store at least 100GB of selected data, you have the chance to receive a free Amazon Echo Dot.
  • CBECC-Com Icon

    CBECC-Com

    Nonresidential California Energy Commission Performance Compliance

    California Energy Commission software for nonresidential building energy code compliance analysis based on the performance path. License (modified BSD) for CEC Compliance Engine and CBECC-Com UI: https://sourceforge.net/p/cbecc-com/code/HEAD/tree/trunk/CBECC-Com13/License.txt License for embedded EnergyPlus software: https://sourceforge.net/p/cbecc-com/code/HEAD/tree/trunk/CBECC-Com13/License-EPlusUser.txt

    Downloads: 0 This Week Last Update: See Project
  • Elvira

    The Elvira project is a suite of tools to perform high-throughput genomic assemblies of repetitive, structured samples such as viruses or targeted regions of larger genomes.

    Downloads: 0 This Week Last Update: See Project
  • Insight Toolkit Icon

    Insight Toolkit

    ITK is an open-source software system to support the Visible Human Project. Currently under active development, ITK employs leading-edge segmentation and registration algorithms in two, three, and more dimensions.

  • WavePacket (C++) Icon

    WavePacket (C++)

    Time-dependent simulation of open and closed quantum systems

    WavePacket is a program package for numerical simulation of quantum-mechanical wavepacket dynamics for distinguishable particles. It can be used to solve one or more (i.e. coupled channels) time-independent or time-dependent (linear) Schrödinger and Liouville-von Neumann-equations. Optionally accounting for the interaction with external electric fields within the semiclassical dipole approximation, WavePacket can simulate modern experiments using ultrashort light pulses in photo-induced physics or chemistry. WavePacket is especially suitable for teaching of quantum mechanics as well as for research projects in physics, chemistry, and scientific computing. The present C++ version is an object-oriented rewrite of the existing Matlab version aiming to be more flexible. In particular, the goals are easy handling of open and closed systems and support for unusual setups.

    Downloads: 2 This Week Last Update: See Project
  • licas Icon

    licas

    Framework for intelligent service-based networks. Mobile compatible.

    Fully integrated framework for building and deploying service-based networks (SOA / Microservices). Communication includes XML-RPC, REST and Web Services. Other features include service protection, admin scripts, metadata, query processes, autonomous, agent-based, or self-organising. Special to the system are its AI and text-processing features. In particular, there is an Autonomic Manager framework with a BPEL-style execution script. Sub-packages include text or query processing and a problem solver provides a range of algorithms. These can also be used separately, but advanced programming and configuration is required. A free All-in-One GUI allows you to manage services and function, and add your own modules. Example Apps are included and the images illustrate the functionality. The open source p2p server requires only the HTTP address and optional passwords. Small jar file sizes and mobile compatible.

  • Microsoft Office 365 monitoring simplified Microsoft Office 365 monitoring simplified Icon
    Microsoft Office 365 monitoring simplified Icon

    Monitor your Office 365® (O365) Exchange™ mailboxes and system applications with the SolarWinds® Server & Application Monitor unified platform.

    SolarWinds Server & Application Monitor allows you to monitor your hybrid IT applications and systems. Monitor Microsoft® Office 365 Exchange side by side on your on-premises Exchange server and other applications. Check, track, and report on O365 user/shared mailbox growth, users over quota, archived mailboxes, inactive mailboxes, mobile device, mailbox groups, and more. You can also monitor Microsoft portal access to help ensure you’re meeting your SLAs.
  • TIES Icon

    TIES

    A smart search engine for medical documents

    TIES (Text Information Extraction System) is a clinical text search engine that uses Natural Language Processing techniques to extract medical concepts from free text clinical reports. It provides secure de-identified access to this information and has in built collaboration tools and honest broker functionality. It is licensed for academic use under the BSD license. For commercial use please contact Nexi at http://nexihub.com

  • XSB Icon

    XSB

    Logic Programming and Deductive Database system (Tabled Prolog) for Unix and Windows.

    Downloads: 35 This Week Last Update: See Project
  • LaBB-CAT Icon

    LaBB-CAT

    A linguistic annotation store

    LABB-CAT is a browser-based linguistics research tool that stores recordings and regular-expression searchable text transcripts of interviews. The search results, entire transcripts, and media, can be viewed or exported in a variety of format

    Downloads: 4 This Week Last Update: See Project
  • com-hfg Icon

    com-hfg

    java library for XML, HTML, or SVG generation + bioinformatics classes

    The com.hfg (hairyfatguy.com) library is a collection of utility classes that make it easy to construct XML, HTML, XHTML, or SVG in an object-oriented way from within your Java application or webapp. It also contains other IO utilities and bioinformatics classes for phylogenetic trees, taxonomy, and multi-chain proteins. Requires JDK1.8.

    Downloads: 0 This Week Last Update: See Project
  • GrowthRates

    Calculate growth rates from microplate reader output

    GrowthRates uses the output from microbial growth rate experiments that are done using microtiter plate readers to caculate the best-fit growth rates, the lag times and the maximum OD.

    Downloads: 29 This Week Last Update: See Project
  • Use DigitalOcean to Build, Deploy & Scale Web Apps Use DigitalOcean to Build, Deploy & Scale Web Apps Icon
    Use DigitalOcean to Build, Deploy & Scale Web Apps Icon

    The ease and simplicity of DigitalOcean gives developers more time to build and innovate for their customers.

    Thousands of businesses and developers around the world use DigitalOcean to easily deploy, manage, and scale applications of any size with less infrastructure friction. Go from one to a thousand virtual servers in seconds. Also, we continue to add hundreds of in-depth tutorials to our documentation library and have an active online community to get the support you need to succeed.
  • PAMGUARD Icon

    PAMGUARD

    Detection Classification and Localisation of marine mammals

    The PAMGUARD project develops software to help detect, locate and classify marine mammals using Passive Acoustic Monitoring.

  • SAGA GIS Icon

    SAGA GIS

    SAGA - System for Automated Geoscientific Analyses - is a Geographic Information System (GIS) software with immense capabilities for geodata processing and analysis. SAGA is programmed in the object oriented C++ language and supports the implementation of new functions with a very effective Application Programming Interface (API). Functions are organised as modules in framework independent Module Libraries and can be accessed via SAGA’s Graphical User Interface (GUI) or various scripting environments (shell scripts, Python, R, ...). Please provide the following reference in your work if you are using SAGA: Conrad, O., Bechtel, B., Bock, M., Dietrich, H., Fischer, E., Gerlitz, L., Wehberg, J., Wichmann, V., and Boehner, J. (2015): System for Automated Geoscientific Analyses (SAGA) v. 2.1.4. Geosci. Model Dev., 8, 1991-2007, doi:10.5194/gmd-8-1991-2015. http://www.geosci-model-dev.net/8/1991/2015/gmd-8-1991-2015.html.

  • AtomProbeLab Icon

    AtomProbeLab

    Matlab-based analysis of Atom Probe Data

    A collection of scripts and functions for the analysis of atom probe tomography data. Currently, this includes: standard file operations, plotting mass spectra, mass spectra analysis and peak deconvolution. If you are looking for Dan Haley's "weights" program, go here https://sourceforge.net/projects/apttools/files/extras/

    Downloads: 10 This Week Last Update: See Project
  • libTheSky Icon

    libTheSky

    Fortran library to compute positions of celestial bodies

    libTheSky is a Fortran library to compute positions of celestial bodies (Moon, planets, stars) and events (conjunctions, eclipses). It forms the core of the software that produces the Dutch popular-astronomy website http://hemel.waarnemen.com

    Downloads: 2 This Week Last Update: See Project
  • TCNOpen Icon

    TCNOpen

    Components for IEC61375 standardised communication

    TCNOpen is an open source initiative which the partner railway industries created with the aim to build in collaboration some key parts of new or upcoming railway standards, commonly known under the name TCN. TCN (Train Communication Network) is a series of international standards (IEC61375) developed by Working Group 43 of the IEC (International Electrotechnical Commission), specifying a communication system for the data communication within and between vehicles of a train. It is currently in use on many thousands of trains in the world in order to allow electronic devices to exchange information while operating aboard the same train. TCNOpen follows the Open Source scheme, as the software is jointly developed by participating companies, according to their role, so as to achieve cheaper, quicker and better quality results. Licenses: TRDP: MPLv2.0 http://www.mozilla.org/MPL/2.0/ TRDPSpy: GPL http://www.gnu.org/licenses/gpl.html

    Downloads: 29 This Week Last Update: See Project
  • Altaxo Data Processing/Plotting Program Icon

    Altaxo Data Processing/Plotting Program

    Data manipulation and plotting program with scripting

    Altaxo is a data manipulation and plotting program written in C# for MS.NET. It is featuring worksheet views and plot views, a scripting language (currently C#) for data processing and automation, import of data from ASCII files or from images, export of graphs and embedding of graphs in other documents.

    Downloads: 19 This Week Last Update: See Project
  • Armadillo C++ matrix library Icon

    Armadillo C++ matrix library

    Fast C++ library for linear algebra (matrix maths) and scientific computing. Easy to use functions and syntax, deliberately similar to Matlab. Uses template meta-programming techniques. Also provides efficient wrappers for LAPACK, BLAS, ATLAS, ARPACK and SuperLU libraries, including high-performance versions such as OpenBLAS and Intel MKL. Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. For more details, see http://arma.sourceforge.net

  • WavePacket (Matlab) Icon

    WavePacket (Matlab)

    Dynamics of quantum systems, controlled by external fields

    WavePacket is a program package for numerical simulation of quantum-mechanical wavepacket dynamics for distinguishable particles. It can be used to solve one or more (i.e. coupled channels) time-independent or time-dependent (linear) Schrödinger and Liouville-von Neumann-equations. Optionally accounting for the interaction with external electric fields within the semiclassical dipole approximation, WavePacket can simulate modern experiments using ultrashort light pulses in photo-induced physics or chemistry, including quantum optimal control. The graphical capabilities allow visualization 'on the fly', including Wigner transforms to phase space. A description of WavePacket can be found in our manuscript at http://dx.doi.org/10.1016/j.cpc.2016.12.007. For examples / movies, see also the Wiki pages of the WavePacket main project. First established in 2004, the present Matlab version is in a stable, mature state. Further development mainly by Burkhard Schmidt at Free University Berlin

  • linuxptp

    PTP IEEE 1588 stack for Linux

    This project is an implementation of the Precision Time Protocol (PTP) according to IEEE standard 1588 for Linux.

  • Systems Biology Format Converter

    The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another. The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ . Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters is highly facilitated. SBFC can be executed in two modes: 1. standalone executable downloading the package provided in this website; 2. web-service at http://www.ebi.ac.uk/biomodels/tools/converters . For general discussion about SBFC, please use the forum sbfc-forum@googlegroups.com . A mailing-list is also available for developers: sbfc-devel@googlegroups.com Thanks for using SBFC! The SBFC Team

  • OpenDSS Icon

    OpenDSS

    EPRI Distribution System Simulator

    The OpenDSS is an electric power Distribution System Simulator (DSS) for supporting distributed resource integration and grid modernization efforts. See Discussion Forum for latest news.

  • ToxTrac Icon

    ToxTrac

    A fast and robust software for tracking organisms

    ToxTrac is a free Windows program optimized for tracking animals. It uses an advanced tracking algorithm that is robust; very fast; and that can handle one or several animals in one or several environments. The program provides useful statistics as output. ToxTrac can be used for fish, insects, rodents, etc. If used, please cite: Rodriguez, A., Zhang, H., Klaminder, J., Brodin, T., Andersson, P. L. and Andersson, M. (2017). ToxTrac: a fast and robust software for tracking organisms. Methods in Ecology and Evolution. 2017(00):1-5. Rodriguez, A., Zhang, H., Klaminder, J., Brodin, T., and Andersson, M. (2017). ToxId: an algorithm to track the identity of multiple animals. Scientific Reports. 7(1):14774. Contact Magnus Andersson, Department of Physics, Umeå University magnus.andersson@umu.se Support Alvaro Rodriguez, Main Developer o_siyeza@hotmail.com Supported by Kempestiftelserna

  • ODIN Icon

    ODIN

    develop, simulate and run magnetic resonance sequences

    ODIN is a free software framework for rapid prototyping of magnetic resonance imaging (MRI) sequences. The sequences can be tested, simulated and executed on scanner hardware from different manufacturers.

  • GATE Icon

    GATE

    GATE (General Architecture for Text Engineering) is an architecture, framework and development environment for developing, evaluating and embedding Human Language Technology. See http://gate.ac.uk for full details.

  • Fudaa

    Fudaa is an Object Oriented and Distributed Integration Platform For Scientific Codes. This platform,written in Java/Corba, gives all the tools needed to build a communication interface and a graphic user interface for scientific codes.

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