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A multi-modeling and simulation environment to study complex systems
...The models can be developed with the DEVS formalism or with the classical mathematical formalism: Ordinary Differential Equation with Euler, Range-Kutta or QSS integrator, Finite state automaton (FDDEVS, UML State chart, Hybrid Petri net). The VLE environment provides an IDE to develop C++ models, DEVS coupled models. VLE have also three ports to use the VFL with Python, Java and R programming languages.
A lot of fish in a shoal, in a gigantic scientific ocean.
Ours organization website GCModeller.org is coming online soon!
Shoal Shell is the sub project for the "genome-in-code"(http://code.google.com/p/genome-in-code/) virtual cell modelling project of the bacteria Xcc 8004.
Shoal Shell aim at provide the modelling tool and the debugging tool for the GCModeller virtual cell modelling, And from the extendible library package, shoal shell can manage to accomplish the entire modelling job for any other bacteria species.
Shoal Shell Project...
Name: SPA
Full name: SNP based pathway analysis
Maintainer: jiangyongshuai@gmail.com liuguiyou1981@163.com
Language: R package
Description:
SPA is an R package which can identify disease or phenotype related pathways.
Input rs# and GWAS test p-values, you can get the related pathways.
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