Showing 19 open source projects for "application"

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  • 1
    TXM

    TXM

    Unicode XML TEI text analysis platform

    TXM is a free and open-source cross-platform Unicode & XML based text analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textometrie.ens-lyon.fr/spip.php?rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP...
    Downloads: 17 This Week
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  • 2
    Bio7
    The application Bio7 is an integrated development environment for ecological modelling and contains powerful tools for model creation, scientific image analysis and statistical analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration and extensibility because of its plug-in structure and the possibility of customization.
    Downloads: 2 This Week
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  • 3
    Biomechanics
    Computer programs for application in Sports science, Physical Culture, among others. By Enrique R.P. Buendía Lozada. buendiaenr@gmail.com , Benemérita Universidad Autónoma de Puebla (BUAP), México. (Software without any warranty).
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    Downloads: 8 This Week
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  • 4

    fscaret_shiny

    UI for fscaret

    User Interface (ui) application which implements the automated feature selection provided by the 'fscaret' package of R-environment.
    Downloads: 0 This Week
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  • 5
    This application allow user to predict dissolution profile of solid dispersion systems based on algorithms like symbolic regression, deep neural networks, random forests or generalized boosted models. Those techniques can be combined to create expert system. Application was created as a part of project K/DSC/004290 subsidy for young researchers from Polish Ministry of Higher Education.
    Downloads: 0 This Week
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  • 6
    Maui

    Maui

    Maui is the Maltcms User Interface

    Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas.
    Downloads: 0 This Week
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  • 7
    SWire4R

    SWire4R

    An R package enabling R to interact with Stata for data exchange

    ...SWire4R uses SWire for connecting R to Stata. SWire is a plugin for Stata >=13 which acts like a server: client applications can query SWire for interacting with Stata. SWire4R acts like a client application for Swire, providing the user with various basic functions for retrieving data from Stata and exporting data to Stata. SWire4R must be compiled by R. For more information about SWire, visit https://sourceforge.net/projects/swire/
    Downloads: 0 This Week
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  • 8

    Chinese I Ching R Algorithms

    Chinese I Ching Algorithms implemented with R programming

    ...This project tries to realize these algorithms with statistical programming. Overcoming the long span has important meanings. First, we can verify the validity of algorithm with big data. Second, we can put them into unprecedented wide application in the age of data. Third, the unique inspection of I Ching that linked "all the universe" open new eyes for us in thought and methodology about interdisciplinary use of data. This program is open-source for human. If you are interested in it, welcome to discuss and work together.
    Downloads: 0 This Week
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  • 9

    iMir

    Integrated pipeline for HT miRNA-Seq data analysis

    Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular pipeline, called iMir, integrating multiple open source modules and resource in an automated workflow, devising different statistical approaches to analyze data rigorously. iMir comprises also a Graphical User Interface (GUI), so that the pipeline is particularly suited for biologist and early stage bioinformaticians and produces both graphics and text outputs.
    Downloads: 0 This Week
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  • 10

    Deem

    Analyze time-course data with significance tests, clustering, modeling

    ...Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional currently. The app was and is developed at the University of Rochester (http://cbim.urmc.rochester.edu) under the GPL 3.0 license. This is a fork of that project.
    Downloads: 0 This Week
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  • 11
    SimiTriX-SimiTetra

    SimiTriX-SimiTetra

    Similarity, Comparative genomic, Visualization, Eclipse RCP, SimiTri

    This application system is based on Eclipse RCP, and it uses the JFreeChart and JOGL library to implement the chart drawing and OpenGL. There are some scripts to generate similarity data for main application and to analysis result. It is an useful tool to visualize relative similarity relationship between different datasets.
    Downloads: 0 This Week
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  • 12
    jrdistribution

    jrdistribution

    Combines R console with GUI for analysis of probability distributions.

    ...You are also able to perform more complex computing being provided R console waiting for your orders.GUI and R console are connected and you can change the probability parameters in the graphical interface and then use them in your script. Moreover, when you change appropriate variables writing an R function, you can see the GUI synchronizing with it. To use the application you should be able to run Java and have basic R environment installed. You can download it here: http://www.r-project.org/index.html JRdistribution uses RCaller library which is available here: https://code.google.com/p/rcaller/
    Downloads: 0 This Week
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  • 13
    imDEV

    imDEV

    Tools for multivariate data visualization, exploration and analysis.

    You may also like some newer work: http://createdatasol.com/ Project imDEV is an application of RExcel, which seamlessly integrates Excel and R for tasks focused on multivariate data visualization, exploration, and analysis. Interactive modules for dimensional reduction (imPCA), prediction (imPLS), feature selection, analysis of correlation (imCorrelations) and generation of networked structures (imGraph) provide an integrated environment for systems level analysis of multivariate data.
    Downloads: 4 This Week
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  • 14
    CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
    Downloads: 0 This Week
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  • 15
    Peakplot is a Perl implemented freely available software application which labels peptide tandem mass spectra retrospectively after a Mascot database search. Availability: http://fgcz-peakplot.uzh.ch/
    Downloads: 0 This Week
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  • 16
    ...For NGS data Chipster contains a built-in genome browser, which highlights SNPs and automatically indexes BAM files and calculates coverage. Chipster’s ability to provide a biologist-friendly access to a powerful analysis platform is technically based on a desktop application user interface, a flexible distributed architecture, and the ability to integrate many types of analysis tools (command line, R/Bioconductor, Java, Web Services etc). The platform is generic and easily extendable to other areas, even beyond bioinformatics. For more information, please see http://chipster.csc.fi and http://genomebiology.com/1471-2164/12/
    Downloads: 0 This Week
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  • 17
    ANOSE is a web application (a web site) that allows software engineers to collect information about software projects and perform statistical analysis on the data collected. A key goal in ANOSE is to provide an easy to use user interface and efficient da
    Downloads: 1 This Week
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  • 18
    An Optical Character Recognition application for high quality printed text, geared towards (but not restricted to) the Bengali script.
    Downloads: 0 This Week
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  • 19
    Predictive Networks

    Predictive Networks

    Web application providing analysis of biomedical relationships.

    Web application providing analysis of biomedical relationships. Built using the Grails web application framework (http://grails.org/) with MySQL (http://www.mysql.com/) as a back-end datastore and utilizing R (http://www.r-project.org/) for statistical analysis. Developed by the Dana Farber Cancer Institute (http://compbio.dfci.harvard.edu/) and Entagen (http://www.entagen.com).
    Downloads: 0 This Week
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