Search Results for "java open source" - Page 8
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Showing 254 open source projects for "java open source"
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An R package implementation of a consensus clustering methodology. This package allows users to perform re-sampling statistics based clustering using multiple clustering algorithms to assess the robustness of both clusters and members of clusters.
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DuffyRNAseq is an R package that implements an analysis pipeline for processing RNA-seq data from Illumina NextGen sequencers, to measure gene transcription and differential expression.
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MICROSATELIGHT is a Perl/Tk graphical user interface (GUI) that facilitates several tasks when scoring microsatellites.
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XT-SDTM project move to CI-Reports project. Please visit the following CI-Reports project. http://sourceforge.net/projects/ci-reports/
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Information Security Made Simple and Affordable | CarbideGet expert guidance and smart tools to launch or level up your security and compliance efforts without the complexity.
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CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
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FunctSNP is an R interface to an SQL database for linking single nucleotide polymorphisms (SNPs) to functional knowledge. FunctSNP should work on any OS on which R runs.
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This package, for R environment, detects DAE peaks ratio on data gotten from LightCycler instrument.
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Peakplot is a Perl implemented freely available software application which labels peptide tandem mass spectra retrospectively after a Mascot database search. Availability: http://fgcz-peakplot.uzh.ch/
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This project aims at developing R-based Software for the analysis of typical neuroscientific data. These will include time resolved bootstrap tests and fitting and testing of psychometric functions.
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In this very first part of the project OpenSpaceSyntax is a collection of functions in shall scripts oriented to the calculation of classic measures of a space syntax analisys procedure for urban fabrics and based on GIS-GRASS (grass.itc.it).
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rdv-framework is designed to evaluate and compare ecological conservation reserve selection alogrithms .
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This project is goaled a r-language wrap of Artificial Neural Network library libfann. also known as R-binding libfann
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P2EMA (Perl Pipeline to Expedite Microsatellite Analysis)
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Chipster is a biologist-friendly analysis software for high-throughput data. It contains over 200 analysis tools for next generation sequencing (NGS), microarray and proteomics data. Users can combine tools in automatic analysis workflows, which can be shared. Chipster's interactive visualizations allow users to select datapoints and create new gene lists. For NGS data Chipster contains a built-in genome browser, which highlights SNPs and automatically indexes BAM files and calculates...
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ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
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My goal is a library for R (www.r-project.org) which encodes concepts relevant to statistical analysis in ecology in relatively easy scalable functions. Includes hierarchical scaling of predictors, density calculations, lme4 model sets, etc...
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Neural Network for physicists. A flexible code in which the user has high control of the network parameters. The code provides a chi^2 cost function. The code accepts user-defined cost function and neuron activation functions.
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GNUexp is a GNUstep/Cocoa framework and a collection of tools helping you to plan, develop, and administer applications associated with visual psychophysics, experimental psychology and statistical data analysis.
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NetWorkSpaces, developed by Scientific Computing Associates Inc., provides a framework to coordinate programs written in R. It allows users to write parallel programs in R easily.
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ANOSE is a web application (a web site) that allows software engineers to collect information about software projects and perform statistical analysis on the data collected. A key goal in ANOSE is to provide an easy to use user interface and efficient da
