Open Source Linux Research Software
Sort By:
Research Software for Linux
View 3 business solutionsBrowse free open source Research software and projects for Linux below. Use the toggles on the left to filter open source Research software by OS, license, language, programming language, and project status.
-
Gen AI apps are built with MongoDB AtlasMongoDB Atlas provides built-in vector search and a flexible document model so developers can build, scale, and run gen AI apps without stitching together multiple databases. From LLM integration to semantic search, Atlas simplifies your AI architecture—and it’s free to get started.
-
Our Free Plans just got better! | Auth0You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.
-
1
GNSS-SDR
An open source software-defined GNSS receiver
An open source software-defined Global Navigation Satellite Systems (GNSS) receiver written in C++ and based on the GNU Radio framework. -
2
Virastyar
Virastyar is an spell checker for low-resource languages
Virastyar is a free and open-source (FOSS) spell checker. It stands upon the shoulders of many free/libre/open-source (FLOSS) libraries developed for processing low-resource languages, especially Persian and RTL languages Publications: Kashefi, O., Nasri, M., & Kanani, K. (2010). Towards Automatic Persian Spell Checking. SCICT. Kashefi, O., Sharifi, M., & Minaie, B. (2013). A novel string distance metric for ranking Persian respelling suggestions. Natural Language Engineering, 19(2), 259-284. Rasooli, M. S., Kahefi, O., & Minaei-Bidgoli, B. (2011). Effect of adaptive spell checking in Persian. In NLP-KE Contributors: Omid Kashefi Azadeh Zamanifar Masoumeh Mashaiekhi Meisam Pourafzal Reza Refaei Mohammad Hedayati Kamiar Kanani Mehrdad Senobari Sina Iravanin Mohammad Sadegh Rasooli Mohsen Hoseinalizadeh Mitra Nasri Alireza Dehlaghi Fatemeh Ahmadi Neda PourMorteza -
3
Stellarium
GPL software which renders realistic skies in real time
Stellarium is a free GPL software which renders realistic skies in real time with OpenGL. It is available for Linux/Unix, Windows and macOS. With Stellarium, you really see what you can see with your eyes, binoculars or a small telescope. Stellarium is a free open source planetarium for your computer. It shows a realistic sky in 3D, just like what you see with the naked eye, binoculars or a telescope. Plugin system adding artifical satellites, ocular simulation, telescope control and more. Ability to add new solar system objects from online resources. Add your own deep sky objects, landscapes, constellation images, scripts, etc. Supernovae and novae simulation. Exoplanet locations. 3D sceneries. Skinnable landscapes with spheric panorama projection. -
4
moebinv
C++ libraries for manipulations in non-Euclidean geometry
These are two C++ libraries for symbolic, numeric and graphical manipulations in non-Euclidean geometry. There is GUI which allows to interact with these libraries by mouse clicks. On a dipper level the first library Cycle implements basic operations on cycles (quadrics) through FSCc construction. The second library Figure operates on ensembles of cycles connected by Moebius-invariant relations, e.g. orthogonality. Both libraries are based on the Clifford algebra capacities of the GiNaC computer algebra system (http://ginac.de). Besides C++ libraries there is a Python wrapper, which can be used in interactive mode (https://codeocean.com/capsule/7952650/). Both libraries work in arbitrary dimensions and signatures of metric. Additionally, there are some 2D/3D-specific routines including a visualisation to PostScript files through Asymptote (http://asymptote.sourcefourge.net) software. The source is written in literate programming NoWeb. -
Keep company data safe with Chrome EnterpriseMake AI work your way with Chrome Enterprise. Block unapproved sites and set custom data controls that align with your company's policies.
-
5
Biblatex is a LaTeX package which provides full-featured bibliographic facilities
-
6
Containerization (Apple)
Containerization is a Swift package for running Linux containers
This repository provides educational material and sample code that demystify how containerization works and how container components fit together in practice. It walks through the responsibilities of an image format, registry, and runtime, and shows how a minimal runtime can assemble an isolated process with the right filesystem view, environment, and entrypoint. The samples highlight security hardening considerations—such as process isolation, filesystem scoping, and least-privilege execution—so that containers are not just portable, but safer by default. Developers get a blueprint for taking standard container images and running them in a way that respects platform conventions, tooling, and policies. The emphasis is on clarity and standards alignment rather than building a production-grade engine, which makes the code ideal for learning and experimentation. -
7
Hypernomicon
Hypertext-infused philosophy personal database software
Hypernomicon is a personal productivity/database application for researchers that combines structured note-taking, mind-mapping, management of files (e.g., PDFs) and folders, and reference management into an integrated environment that organizes all of the above into semantic networks or hierarchies in terms of debates, positions, arguments, labels, terminology/concepts, and user-defined keywords by means of database relations and automatically generated hyperlinks (hence ‘Hyper’ in the name). Hypernomicon keeps track of all these things in a highly structured, thoroughly indexed and user friendly relational database, automatically generates semantic hyperlinks between all of them, and presents this information in many different forms so that you are constantly informed of ways all of your information is related that you had not realized. -
8
Hacker Laws
Laws, theories, principles and patterns useful to developers
Laws, Theories, Principles and Patterns that developers will find useful. There are lots of laws which people discuss when talking about development. This repository is a reference and overview of some of the most common ones. Principles and laws to follow such as: If a program is made up of two parts, part A, which must be executed by a single processor, and part B, which can be parallelised, then we see that adding multiple processors to the system executing the program can only have a limited benefit. It can potentially greatly improve the speed of part B - but the speed of part A will remain unchanged. Also, theories like The Broken Windows Theory, which suggests that visible signs of crime (or lack of care of an environment) lead to further and more serious crimes (or further deterioration of the environment). Conway's Law suggests that the technical boundaries of a system will reflect the structure of the organisation. These among others, are featured in this project. -
9
DSpace
Open Source "turn-key" institutional repository application
Open Source Digital Asset Management system that enables services for access, provision, stewardship and re-use of digital assets with a focus on educational and research materials For Support, please see: https://wiki.lyrasis.org/display/DSPACE/Support RELEASES: The most recent releases are now distributed via GitHub: https://github.com/DSpace/DSpace/releases MAILING LISTS: Mailing lists have all been moved to Google Groups: https://wiki.lyrasis.org/display/DSPACE/Mailing+Lists -
Free and Open Source HR SoftwareGive your HR team the tools they need to streamline administrative tasks, support employees, and make informed decisions with the OrangeHRM free and open source HR software.
-
10
KingJamesPureBibleSearch
GUI Application to Search and Count the Pure King James Bible
Study and analyze the Fingerprint of God in the mathematical structure, known as the King James Code, of the King James text of the Holy Bible. Allows instant real-time searches, with an autocompleter droplist to assist with words which come next. Jump to specific words, verses, or chapters by number, and see all possible count statistics of phrases within the text. Graphically visualize search results, cross-reference sources and word lexicons, and search foreign translations derived from the same Divine Masoretic/Textus Receptus Vine of Scripture. For more info and downloads, see http://www.purebiblesearch.com/ For details on the King James Code, see http://visitbethelchurch.com/ -
11
Choco is not hosted on sourceforge anymore. Please now visit http://choco-solver.org/ !
-
12
Catalyst
Accelerated deep learning R&D
Catalyst is a PyTorch framework for accelerated Deep Learning research and development. It allows you to write compact but full-featured Deep Learning pipelines with just a few lines of code. With Catalyst you get a full set of features including a training loop with metrics, model checkpointing and more, all without the boilerplate. Catalyst is focused on reproducibility, rapid experimentation, and codebase reuse so you can break the cycle of writing another regular train loop and make something totally new. Catalyst is compatible with Python 3.6+. PyTorch 1.1+, and has been tested on Ubuntu 16.04/18.04/20.04, macOS 10.15, Windows 10 and Windows Subsystem for Linux. It's part of the PyTorch Ecosystem, as well as the Catalyst Ecosystem which includes Alchemy (experiments logging & visualization) and Reaction (convenient deep learning models serving). -
13
DIG
A library for graph deep learning research
The key difference with current graph deep learning libraries, such as PyTorch Geometric (PyG) and Deep Graph Library (DGL), is that, while PyG and DGL support basic graph deep learning operations, DIG provides a unified testbed for higher level, research-oriented graph deep learning tasks, such as graph generation, self-supervised learning, explainability, 3D graphs, and graph out-of-distribution. If you are working or plan to work on research in graph deep learning, DIG enables you to develop your own methods within our extensible framework, and compare with current baseline methods using common datasets and evaluation metrics without extra efforts. It includes unified implementations of data interfaces, common algorithms, and evaluation metrics for several advanced tasks. Our goal is to enable researchers to easily implement and benchmark algorithms. -
14
Data Science at the Command Line
Data science at the command line
Command Line by Jeroen Janssens, published by O’Reilly Media in October 2021. Obtain, scrub, explore, and model data with Unix Power Tools. This repository contains the full text, data, and scripts used in the second edition of the book Data Science at the Command Line by Jeroen Janssens. This thoroughly revised guide demonstrates how the flexibility of the command line can help you become a more efficient and productive data scientist. You’ll learn how to combine small yet powerful command-line tools to quickly obtain, scrub, explore, and model your data. To get you started, author Jeroen Janssens provides a Docker image packed with over 100 Unix power tools, useful whether you work with Windows, macOS, or Linux. You’ll quickly discover why the command line is an agile, scalable, and extensible technology. Even if you’re comfortable processing data with Python or R, you’ll learn how to greatly improve your data science workflow by leveraging the command line’s power. -
15
Deep Learning for Medical Applications
Deep Learning Papers on Medical Image Analysis
Deep-Learning-for-Medical-Applications is a repository that compiles deep learning methods, code implementations, and examples applied to medical imaging and healthcare data. The project addresses domain-specific challenges like segmentation, classification, detection, and multimodal data (e.g. MRI, CT, X-ray) using state-of-the-art architectures (e.g. U-Net, ResNet, GAN variants) tailored to medical constraints (small datasets, annotation costs, class imbalance). It includes Jupyter notebooks, model architectures, data preprocessing pipelines, and evaluation scripts specific to medical imaging tasks. The repository may also contain domain-specific modules: loss functions like Dice, focal loss, metrics such as sensitivity/recall/IoU, and visualization utilities for overlaying segmentation masks. -
16
Linux command
Linux command encyclopedia search tool
Linux command encyclopedia search tool, the content includes Linux command manual, detailed explanation, study, and collection. The current warehouse has collected more than 570 Linux commands. It is a non-profit warehouse. It has generated a web site for easy use. Currently, the site does not have any advertisements. The content includes Linux command manuals, detailed explanations, and learning. Very worthy collection of Linux command quick reference manual. The copyright belongs to the original author, and does not assume any responsibility for any legal issues and risks. There is no commercial purpose. If you think that your copyright is infringed, please write to us. I cannot guarantee the correctness of the content. The risks caused by using the content of this site have nothing to do with me. When using this site, it means that you have accepted the terms of use and privacy terms of this site. -
17
SigPack
SigPack - A signal processing library using Armadillo
SigPack is a C++ signal processing library using the Armadillo library as a base. The API will be familiar for those who has used IT++ and Octave/Matlab. -
18
Mac upgraded to OSX, Lepard which do not support os9 anymore. This project is build to help DNA Strider user to get their data out and perform some basic DNA analyze function.
-
19
jMIR
Music research software
jMIR is an open-source software suite implemented in Java for use in music information retrieval (MIR) research. It can be used to study music in the form of audio recordings, symbolic encodings and lyrical transcriptions, and can also mine cultural information from the Internet. It also includes tools for managing and profiling large music collections and for checking audio for production errors. jMIR includes software for extracting features, applying machine learning algorithms, applying heuristic error error checkers, mining metadata and analyzing metadata. -
20
WIKINDX
Virtual Research Environment / On-line Bibliography Manager
Reference management, bibliography management, citations and a whole lot more. Designed by academics for academics, under continuous development since 2003, and used by both individuals and major research institutions worldwide, WIKINDX is a Virtual Research Environment (an enhanced on-line bibliography manager) storing searchable references, notes, files, citations, ideas, and more. An integrated WYSIWYG word processor exports formatted articles to RTF and HTML. Plugins include a citation style editor and import/export of bibliographies (BibTeX, Endnote, RIS etc.). WIKINDX supports multiple attachments with each reference, multiple language localizations, and uses a template system to allow users to visually integrate WIKINDX into their sites. WIKINDX runs on a web server giving you and your research group ownership and global access from any web-enabled device. You manage your database, you own your data. WIKINDX can be test-driven at: https://testdrive.wikindx.com -
21
Docear
An Academic Literature Suite
Docear (pronounced dog-ear) is what we call an “academic literature suite”. It integrates everything you need to search, organize and create academic literature in a single application: a digital library, reference manager, PDF and file manager, note taking and mind mapping. And the best: Docear works seemlessly with many existing tools like Mendeley, Microsoft Word, and Foxit Reader. Docear is free and open source, based on Freeplane, funded by the German Federal Ministry of Technology and developed by scientists from around the world, among others from OvGU, and the University of California, Berkeley. -
22
Overhead Imagery Research Data Set (OIRDS) - an annotated data library & tools to aid in the development of computer vision algorithms
-
23
Maktabah Al-Miftah
Integrated Islamic Library
Maktabah Al-Miftah is a Linux digital book reader for Shamela eBook (.bok), Thwab eBook (.th) and its own eBook (.mfth). Version 3.3 is not compatible with Ubuntu 15.10 and up. Version 3.4 runs on Lubuntu 17.04. Now, Version 3.5 runs on Lubuntu 24.04. Its installation is on the Maktabah Al-Miftah Web Site. Maktabah Al-Miftah adalah pembaca kitab digital Linux untuk eBook Syamilah (.bok), eBook Thwab (.th), dan eBooknya sendiri (.mfth). Versi 3.3 tidak kompatibel dengan Ubuntu 15.10 ke atas. Versi 3.4 dapat berjalan di Lubuntu 17.04. Sekarang, Versi 3.5 dapat berjalan di Lubuntu 24.04. Cara pemasangannya ada di Situs Web Maktabah Al-Miftah. -
24
Academic Tech Toolbox
A collection of productivity tools for academic researchers.
A collection of productivity tools for academic researchers: RefTraceback: Found an article/thesis of interest? Want to know more by reading some of the sources referenced by the publication? This tool gives you the convenience of selecting a bunch of references at a time and looking them up in one go. Citation and reference checker: A tool for academics, students and, most of all, proofreaders. Helps identify wrong or missing references/citations in an academic text. Check it out here: https://sourceforge.net/projects/refs-checker/ OSD note: A simple but handy text editor for research notes, to-do lists, etc. https://sourceforge.net/projects/osd-note/ -
25
MSR Tools is a source code evolution analysis tool. It consists of a framework for mining software repositories and tools for metric calculation, visualization, defect prediction.
