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Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.
Graphical editor using HTML5 canvas for input of chemical structures, molecule interactions, as well as protein sequence and 3D structural motifs. Facilitates searches in chemo-informatics, bioinformatics and structural biology .
Ontea - Pattern based Semantic Annotation Platform. Ontea search or create semantic meta data from text or documents using pattern based approaches. Implementation currently includes regular expressions (regex) patterns
stocleka is a project divided into a UI and a library for cleaning user stories and converting them to arff files (used for Weka). it may be mainly used for research and scientific purposes.
This project extends the ASV Toolbox from the Wortschatz-project at the University of Leipzig.
It annotates terms extracted by the "TE" (Terminolgy Extraction) and "Namerec" modules with semantic resources.
Implementation of "online" erasure codec for Hadoop Distributed File System (HDFS). It contains native C library integrated with Java code base of HDFS.
Swarm framework for chemicals, to neurons, to group models and species models and etc. I will try to keep one version of the code independent of any platforms, but I will also be integrating the code with JADE, JBoss and my software.
Maui is a multi-purpose automatic topic indexing algorithm. Given a document, Maui automatically identifies its topics. Depending on the task topics are tags, keywords, keyphrases, vocabulary terms, descriptors or Wikipedia titles.
The project contains algorithms for locating the most central groups in complex networks. In particular implementations of various centrality measures and heuristic search algorithms. All functionality is exposed via XML-RPC for easier exploitation.
A software tool enabling the user to browse through an image stack created by a confocal microscope. Points can be plotted through the stack, producing a digital 3D representation, which can be viewed in 3D and compared with other plots.
This research project seeks to use compiler techniques to perform an attribute-based data-flow analysis on (MOF/UML)models allowing for a syntax-driven validation of a model's static semantics as well as an abstract interpretation of i dynamic behavior.
Aim is to extract the information from the cadastral maps which is stored as scanned images. The extracted information is stored using graph representation. Then we convert these infomation in to CityGML format to visualize and communicate.
The Java class library, that contains classes for calculation of different mathematical relations between object and number sequences and sets: Kendall distance, Spearman distance, similarity measure, L1 distance and others.
A little xml tool which can filter the XML documents according the XPath.Only support part of the XPath. Hope to support full XPath expression and XQuery in the future.
Data Mining Platform is a platform for data mining and analysis. It contains many of the new and sophisticated methods such as kernel-based classification, two-way clustering, bayesian networks, pattern recognition for time series analysis and many other