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GRaPe - a platform-independent software tool for building integrative gene-reaction-protein (GRP) networks. It generates the kinetic equations for each reaction and outputs a SBML document. It also implements two methods for parameter estimation.
A software tool enabling the user to browse through an image stack created by a confocal microscope. Points can be plotted through the stack, producing a digital 3D representation, which can be viewed in 3D and compared with other plots.
Apellicon is a web-based administration suite for Textpresso. Textpresso is an open-source text-mining system for scientific literature. Apellicon implements all of the steps required to build and maintain a Textpresso database.
This research project seeks to use compiler techniques to perform an attribute-based data-flow analysis on (MOF/UML)models allowing for a syntax-driven validation of a model's static semantics as well as an abstract interpretation of i dynamic behavior.
Facilitates data mining/natural language processing experiments to be executed on weblogs, such as classification, clustering and rating. As part of these experiments, it is possible to apply Latent Semantic Analysis.
DATAONTO is a protege tab widget plugin that automatically builds domain ontlogies from relational database's metadata. once ontlogies are generated,this plugin can look for changes in database metadata and implement these changes in ontology.
A framework for solving large systems of linear equations (Ax=b) in a distributed network using different iterative methods. The solver is written on Java, can be run on Windows or Linux. The solver is compatible with either MPICH2 or mpj-express.
Damon is a Distributed AOP Middleware on top of a p2p Overlay Network. Its main aim is to offer the necessary abstractions and services to develop distributed aspects, and to provide scalability to existent or new applications transparently.
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An institutitutional repository to manage publications
This is an open source institutional repository to manage research publications from conception stage to publication stage. It is designed for storing open access publications and all their corresponding metadata. The software manages peer-reviewed journal publications, confrence abstracts and posters, thesis and dissertations and other academic and research outputs.
Not a search engine but navigation routes within a research domain.
The Centre d'Informations (CI) aim is to articulate and display whatever type of knowledge available on a given field (see screenshots examples for various fields).
The software is built as a network of information articulated using concepts (figure). The website should not be understood as a conventional search engine but as different ways to navigate within this knowledge (information and concept) network.
Each information is thoroughly formalized; the aim is not exhaustivity or...