Showing 15 open source projects for "front-end"

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  • 1
    clusterProfiler

    clusterProfiler

    A universal enrichment tool for interpreting omics data

    clusterProfiler is an R/Bioconductor package that provides a unified workflow for functional enrichment analysis to interpret high-throughput omics results. It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can...
    Downloads: 5 This Week
    Last Update:
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  • 2
    pkgdown

    pkgdown

    Generate static html documentation for an R package

    pkgdown is an R package (by the r-lib group) whose purpose is to generate static websites (HTML) for R packages, automatically converting a package’s help files, vignettes, README, NEWS, etc., into a documentation website. It helps package authors share their documentation online with minimal friction. It supports custom templates, themes, and configuration. pkgdown 2.0.0 includes an upgrade from Bootstrap 3 to Bootstrap 5, which is accompanied by a whole bunch of minor UI improvements. If...
    Downloads: 0 This Week
    Last Update:
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  • 3
    LabPlot

    LabPlot

    Data Visualization and Analysis

    LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone.
    Downloads: 30 This Week
    Last Update:
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  • 4
    MHNs Data Science Examples

    MHNs Data Science Examples

    Collection of data science examples.

    Downloads: 0 This Week
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  • 5

    Glycometrics

    Algorithms for glycaemic variability

    Glycometrics is a collection of algorithms that provide metrics for glycaemic variability. Its application is mainly in theoretical endocrinology and diabetes research.
    Downloads: 0 This Week
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  • 6
    No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
    Downloads: 0 This Week
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  • 7
    QBPWCF

    QBPWCF

    PHP library for not only web-based application in Fedora Linux

    此專案的目的是要建立簡單、易用、參數說明完整且富有調整性的PHP元件庫,讓PHP程式設計開發者可以輕鬆地建立高度客製化的應用。 套用當代的術語而言,就是要作為LOW CODE平台的函式庫。
    Downloads: 0 This Week
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  • 8
    AI-Agent-Host

    AI-Agent-Host

    The AI Agent Host is a module-based development environment.

    The AI Agent Host integrates several advanced technologies and offers a unique combination of features for the development of language model-driven applications. The AI Agent Host is a module-based environment designed to facilitate rapid experimentation and testing. It includes a docker-compose configuration with QuestDB, Grafana, Code-Server and Nginx. The AI Agent Host provides a seamless interface for managing and querying data, visualizing results, and coding in real-time. The AI...
    Downloads: 1 This Week
    Last Update:
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  • 9
    methylr

    methylr

    a single shiny solution from sequencer data to pathway analysis

    Here we introduce methylR, a complete pipeline for the analysis of both 450K and EPIC Illumina arrays which not only offers data visualization and normalization but also provide additional features such as the annotation of the genomic features resulting from the analysis, pairwise comparisons of DMCs with different graphical representation plus functional and pathway enrichment as downstream analysis, all packed in a minimal, elegant and intuitive graphical user interface which brings the...
    Downloads: 1 This Week
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  • 10

    Scripting Language Bindings

    A port of WFOPT to the several scripting languages

    This project contains bindings for various scripting languages to the Wheefun Options Parsing Library. It is meant to provide parity with the C implementation so .NET languages can take advantage of WFOPT. For more information, please see the main page.
    Downloads: 0 This Week
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  • 11
    Covidex

    Covidex

    Ultra fast and accurate subtyping tool of viral genomes.

    Viral subtypes or clades represent clusters among isolates from the global population of a defined species. Subtypification is relevant for studies on virus epidemiology, evolution and pathogenesis. In this sense, Covidex was developed as an open source alignment-free machine learning subtyping tool. It is a shiny app that allows fast and accurate classification of viral genomes in pre-defined clusters. If more than 1000 sequences are loaded the tool will run in multithread mode. Capable of...
    Downloads: 0 This Week
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  • 12

    QuantifyPoly(A)

    Quantification of poly(A) sites from 3' end sequencing data

    QuantifyPoly(A) - a tool for quantification of poly(A) sites from 3' end sequencing data. [1] QuantifyPoly(A) user manual Please visit the Wiki page of this website. [2] QuantifyPoly(A) Q&A For Q&A, please visit the Blog page of this website. [3] QuantifyPoly(A) bug report You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website.
    Downloads: 6 This Week
    Last Update:
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  • 13
    yabasta

    yabasta

    Yet Another BAsic Scraper and Text Analysis

    YA BASTA! is a Python/R application for Lyrics Web Scraper and Text Analysis. Web scraping is developed in Python, text analysis in R as Python subprocesses. YA BASTA! is only tested on windows OS. To run YA BASTA! just type on window command prompt: python.exe yabasta.py
    Downloads: 0 This Week
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  • 14
    TOFSIMS

    TOFSIMS

    R/Bioconductor toolkit for mass spectrometry data

    The tofsims project is an R/Bioconductor toolkit designed for processing, analyzing, and visualizing imaging mass spectrometry data from Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) instruments. It supports importing raw and preprocessed data from popular instrument platforms (e.g. IONTOF, Ulvac-Phi) and provides methods for mass calibration, peak picking, and peak integration. The package allows transformation of spectra into 2D image structures (mass images), with operations...
    Downloads: 0 This Week
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  • 15
    DataScienceR

    DataScienceR

    a curated list of R tutorials for Data Science, NLP

    The DataScienceR repository is a curated collection of tutorials, sample code, and project templates for learning data science using the R programming language. It includes an assortment of exercises, sample datasets, and instructional code that cover the core steps of a data science project: data ingestion, cleaning, exploratory analysis, modeling, evaluation, and visualization. Many of the modules demonstrate best practices in R, such as using the tidyverse, R Markdown, modular scripting,...
    Downloads: 0 This Week
    Last Update:
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