Showing 8 open source projects for "genetics"

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  • 1

    BCAW Tool

    Bio Codon Analysis Workflow Tool

    BCAWT was developed using python 3.7 with build in and third-party modules. The usage of BCAWT is made to be very easy where users have only to input a fasta format file containing genes to be analyzed, and a bunch of analysis will be performed with 23 different output files
    Downloads: 0 This Week
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  • 2
    EggLib

    EggLib

    Evolutionary Genetics and Genomics Library

    EggLib has moved to http://mycor.nancy.inra.fr/egglib/ since version 3.0.0.
    Downloads: 0 This Week
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  • 3
    A general-purpose individual-based forward-time population genetics simulation environment
    Downloads: 1 This Week
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  • 4

    CCH

    A genetics tool that identifies genomic regions of shared ancestry

    Combinatorial Conflicting Homozygosity (CCH) uses dense Single Nucleotide Polymorphism (SNP) genotypes to identify regions of the genome inherited from a common ancestor among any or all subsets of a group. Analysis is rapid and can identify loci containing genes for dominant traits. CCH is robust to the presence of phenocopies and can detect undisclosed shared common ancestry. The associated publication regarding CCH may be accessed here: http://www.biomedcentral.com/1471-2164/16/163 If...
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  • 5

    CDPOPgui

    GUI Frontend for CDPOP

    CDPOPgui is a GUI Frontend for CDPOP What is CDPOP? CDPOP (Cost Distance POPulations) is a spatially-explicit simulator of gene-flow in complex landscapes to explain observed population responses and provide a foundation for landscape genetics. The program implements individual-based population modeling with Mendelian inheritance on a resistant landscape. Simulation begins with an initial homogeneous population and followed by divergence through time as functions of individual based...
    Downloads: 0 This Week
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  • 6
    Ouroborus is an artificial life framework for mobile agents on a background of cellular automata. It can be used to teach and research topics such as population genetics, ecology and evolution. The demo includes a curses view and live Csound audio.
    Downloads: 0 This Week
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  • 7
    A small simulator for Mendelian genetics, genetic drift, natural selection and random mutations, built on matplotlib and wxpython. A graph will be generated that traces the distribution of genotypes at successive generations.
    Downloads: 1 This Week
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  • 8
    a cross-platform framework and environment for haplotype analysis with a special focus on human and medical genetics in python/wxpython
    Downloads: 0 This Week
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