Showing 5 open source projects for "fold"

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  • 1
    PoseidonQ  - AI/ML Based QSAR Modeling

    PoseidonQ - AI/ML Based QSAR Modeling

    ML based QSAR Modelling And Translation of Model to Deployable WebApps

    - This Software was made with an intention to make QSAR/QSPR development more efficient and reproducible. - Published in ACS, Journal of Chemical Information and Modeling . Link : https://pubs.acs.org/doi/10.1021/acs.jcim.4c02372 - Simple to use and no compromise on essential features necessary to make reliable QSAR models. - From Generating Reliable ML Based QSAR Models to Developing Your Own QSAR WebApp. For any feedback or queries, contact kabeermuzammil614@gmail.com - Available on...
    Downloads: 13 This Week
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  • 2
    NAVAL-SEM

    NAVAL-SEM

    Free offline SEM software with HTMT, bootstrapping & exports

    NAVAL-SEM is a free, open-source, fully offline desktop application for Structural Equation Modeling (SEM), supporting both PLS-SEM and CB-SEM workflows. Designed for researchers, PhD scholars, professors, students, and analysts, it enables advanced quantitative research without subscriptions, cloud dependencies, or proprietary software restrictions. Key features include visual drag-and-drop model building, bootstrapping, mediation analysis, HTMT, AVE, Composite Reliability (CR),...
    Downloads: 23 This Week
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  • 3
    Alphafold2

    Alphafold2

    Unofficial Pytorch implementation / replication of Alphafold2

    To eventually become an unofficial working Pytorch implementation of Alphafold2, the breathtaking attention network that solved CASP14. Will be gradually implemented as more details of the architecture is released. Once this is replicated, I intend to fold all available amino acid sequences out there in-silico and release it as an academic torrent, to further science. Deepmind has open sourced the official code in Jax, along with the weights! This repository will now be geared towards a straight pytorch translation with some improvements on positional encoding. lhatsk has reported training a modified trunk of this repository, using the same setup as trRosetta, with competitive results. ...
    Downloads: 0 This Week
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  • 4
    ...To measure the entire set of PTMs across diverse proteomes, software must overcome the dual challenges of covering enormous search spaces and distinguishing correct from incorrect spectrum interpretations. Here, we describe TagGraph, a computational tool that overcomes both challenges with an unrestricted string-based search method that is as much as 350-fold faster than existing approaches, and a probabilistic validation model that we optimized for PTM assignments. We applied TagGraph to a published human proteomic dataset of 25 million mass spectra and tripled confident spectrum identifications compared to its original analysis. We identified thousands of modification types on almost 1 million sites in the proteome.
    Downloads: 0 This Week
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  • 5
    Pronac MediaMonkey Extension

    Pronac MediaMonkey Extension

    Recommends music based upon your current taste.

    ...Play the first song from the Now Playing list, it'll recommend you next songs from the same list. NOTE: MAKE SURE THAT SONG SHUFFLE IS TURNED OFF WHILE USING PRONAC. Based upon K-Nearest Neighbor Machine Learning Algorithm, K-Fold Cross Validation and EchoNest for audio features.
    Downloads: 0 This Week
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